Gene Pnuc_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0280 
SymbolnrdR 
ID5052682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp275392 
End bp275838 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content48% 
IMG OID640470432 
Producttranscriptional regulator NrdR 
Protein accessionYP_001155065 
Protein GI145588468 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCTGCC CCTTTTGTCA TAACGACGAT ACCCAGGTTC TAGATACCCG GGTATCGGAT 
GAGGGCGATA CCATTCGTCG CCGTCGCCGT TGTGCCAAAT GCGACAAGCG TTTTACTACT 
TATGAGCGGG TTGAGCTCGT ATTGCCTGCG ATTGTGAAGA AGAACGGCAG TCGTGTGGAA 
TACAGTCATG ATAAGTTAGC AAGCTCTCTG AAGCTAGCTC TCAGGAAACG CCCAGTCTCA 
TCGGATTCTG TTGATGAATC CATTGCCCGC ATTGAAGAAA AACTCCTCAG CCTAGGTGAA 
AAAGAGATCC CTAGCGAACG CGTTGGTGAG TTGGTCATGC GTGAGCTCAA GCGTCTTGAT 
AAAGTGGCCT ATATCCGCTT TGCATCGGTT TATCGCAGCT TTGCAGATAT TGAATCCTTT 
GAGAGCGCAC TTAAAGAATT GAAATAA
 
Protein sequence
MRCPFCHNDD TQVLDTRVSD EGDTIRRRRR CAKCDKRFTT YERVELVLPA IVKKNGSRVE 
YSHDKLASSL KLALRKRPVS SDSVDESIAR IEEKLLSLGE KEIPSERVGE LVMRELKRLD 
KVAYIRFASV YRSFADIESF ESALKELK