Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0131 |
Symbol | |
ID | 5053249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 124781 |
End bp | 126121 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640470283 |
Product | general substrate transporter |
Protein accession | YP_001154916 |
Protein GI | 145588319 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000482205 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAATAATA TCAATCACTT AGAAAAATCA GAAAATGCTC ACTCCTATCG AAAGGTGGCC TTAGCAGCTT GTTTTGGCAC CTTTTTAGAG TGGTATGACT TTCTCACCTT TGCTACCCTA GCAGTCGTGT TTAGCCCCTT ATTTTTTCCA TCTAGTGATC CCAGTACCGG GCTTTTAGCG AGTTTGGCTA CCTTTGGTGT TGGGATGGTG GTCAGACCTA TTGGCGCCGC CTTTTTTGGC TCCCTGGGCG ATCGCATAGG CCGCAAGCCA GTATTTATGG TCACTATTAC GATCATGGGC CTGGCCACGG TCTGCGTAGG CTTTTTACCA ACCTACGCAC AGATTGGTAT TTGGGCGCCA ATCTTGTTGG TTGTACTGCG ACTATTGCAA GGACTCTCAG CCGGGGGAGA GATTGGAGGA AGCGCGGTAT ACCTCACTGA GCATGCGGGC ACTAAAAATC GCGGCTTCAA AACCAGCTTT CTTCAACTGA TGGGGCCACT AGGCATTTTA TTTTCCACCC TACAAATCGC CTTATTGAGA AATTACCTCA CTCCAGAAGA ATTTGAATCC TGGGGCTGGC GTGTCCCCTT TTGGATTTCA ATCATATTGT TGGCTATTGC ATTTAAGGTG CGTATGTCGC TAGAGGAAAC TCCGATTTAC TTGGAGTTAA TGAATAAAAA CCAAAGGTCT GAAAGCCCAC TGCTTGAGAA TTTCAAAGAC CCCAAAACAC GCAAGCATAT GTTTTTACTT TTCTTTTGTA TTTCTGCTGG TGGGGCAATT TTATTTTTTT GTGTTCAGGT ATATACAGCC ATTTATCTTA AGACCTCTAC CAACATTCCT GCTGAAGTAG TCGACAAGCT GAGCATTTAT GGAACAATTT CTCTTTTATT TTTTACGGTA TTTGCTGGCT GGCTTTCAGA CAAAATTGGC AGAAAGCCAG TTGTAGTTAG TGGTTTAGTA CTTGGGGCAG TACTGATCTT GCCGGCATTT GAATTACTCA ATGCACTCGG TAACAATACA TCTAATCAAA ATAATTCAAA TTATTTGCTT GCGCTGATCC TGATTGGAAT ATCAGGAATC TTAGGGCTAG TGGTTGGGCC ACAAACTGCT CTACTCGCAG AGCTTTTCCC TGCCAAATCT CGTAATAGCG CCGCAACACT TCCACATAAT CTGGCCGCAG GCTGGATCGG CGGGCTACTG CCCCTGATAG TGACTTGGAT TAACCGTGAA TATGGGAACG CCACCGCTGG TTTATGGTAT CCAACTGCAT TTTTAATTTG CGCTGCAATA ACAGCGCTGA TCTACTTACC AGAAACGGTA GCAACAAATC TAAGGGAATA A
|
Protein sequence | MNNINHLEKS ENAHSYRKVA LAACFGTFLE WYDFLTFATL AVVFSPLFFP SSDPSTGLLA SLATFGVGMV VRPIGAAFFG SLGDRIGRKP VFMVTITIMG LATVCVGFLP TYAQIGIWAP ILLVVLRLLQ GLSAGGEIGG SAVYLTEHAG TKNRGFKTSF LQLMGPLGIL FSTLQIALLR NYLTPEEFES WGWRVPFWIS IILLAIAFKV RMSLEETPIY LELMNKNQRS ESPLLENFKD PKTRKHMFLL FFCISAGGAI LFFCVQVYTA IYLKTSTNIP AEVVDKLSIY GTISLLFFTV FAGWLSDKIG RKPVVVSGLV LGAVLILPAF ELLNALGNNT SNQNNSNYLL ALILIGISGI LGLVVGPQTA LLAELFPAKS RNSAATLPHN LAAGWIGGLL PLIVTWINRE YGNATAGLWY PTAFLICAAI TALIYLPETV ATNLRE
|
| |