| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1383 |
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| Symbol | |
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| ID | 6183640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1190809 |
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| End bp | 1191414 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671930 |
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| Product | heme exporter protein CcmA |
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| Protein accession | YP_001798103 |
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| Protein GI | 171463990 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.288119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGAAG CGCAAGCGCT TTCTTGTGTT CGTGGTGAAA AACGTTTATT CCAGGATCTA
AACTTAAGGG TTTCCAGCGG GGAGTGTTTA TACGTTCGTG GTGAGAACGG TGTCGGGAAA
ACGAGTCTAT TGAGACTTCT GACAGGCCTA TCCAAACCAG AGGCTGGAGA AATTCTGTGG
AACGGTCAAA CAATCAATAA AGAGGCATCC TTCTATCATT GTGATCTTTT ATTTTTAGGG
CATCGCGATG CCCTAAAAGA AGATCTCTCT GCATTGGAAA ATCTGCAACT CTATGCCGCA
CTAGATGATC TTGATTTATC AGATGACAAG GCTTTGTCTG CTCTCTGGCG TTTTGGATTG
CGCGGGCGCG AACACTTGCC AGTCAATTAT TTGTCTGCCG GTCAAAAGCG TCGTGTGTTA
ATGGCTCGCA TGCTGACACG TCAAGCAAAG CTATGGATAT TGGATGAACC ATTTAATGCG
CTCGATATCC ATGCGGTTCA AGCTTTGCAA GGTCTCATCG CGGAGCATAT GGAACAAGGT
GGTTTGGTGG TGCTAACCAG CCATCAAGAG GTCAGTCTTT CAAATGTGAG GGTGCTTGAT
CTATGA
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| Protein sequence | MLEAQALSCV RGEKRLFQDL NLRVSSGECL YVRGENGVGK TSLLRLLTGL SKPEAGEILW
NGQTINKEAS FYHCDLLFLG HRDALKEDLS ALENLQLYAA LDDLDLSDDK ALSALWRFGL
RGREHLPVNY LSAGQKRRVL MARMLTRQAK LWILDEPFNA LDIHAVQALQ GLIAEHMEQG
GLVVLTSHQE VSLSNVRVLD L
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