| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1375 |
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| Symbol | |
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| ID | 6183179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1184655 |
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| End bp | 1185854 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641671922 |
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| Product | cytochrome c-type biogenesis protein CcmI |
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| Protein accession | YP_001798095 |
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| Protein GI | 171463982 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTAG TGACTAGCTT TTTGGTTTTC GCTTTTCTGC TCTTGGTGCT AGTCCTGGTA
TTAGTGCTTA GACCTTTTTT ATTTCCCGCC AAGAGTAAAG CGACATCACG TCGCCAGATG
AATGCTGCAA TTTATCGAGA AGAGCTTGAT AAATTAGAAG CCGAACATCG AGATGGAGTT
ATTAATTCTG CTGATTATGA AATTTCCCAT GCTGAAATGC GCCAACGACT TTTTCAAGAC
ACTATTGAGG AAGATGATCG TGTAATTGCT GGCTCTGCGA AAAAAACTGC TATTGAATTA
TGTATTTTTA TTGCCCTGCT ATCTTCAGTA CTCTATTTTT CGCTGGGAGA TGTTGTTCGT
ATAGCTCAGC GAAATTCTGA GAGGCCAGTT ACTCAAGAGG GTGTAGAAAA AATGGTGGCT
GAATTTGCCA TCAAGATGGA AAAAGATCCT GGTAACTTGA AGGGCTGGGC AATGTTGGCT
TGCTCATATC GTATCTTGGG CCGCAATGAG GATGCTGCTA AAGCTTATGC ACGCGCTGGT
AACTACATCG ATTCTGATCC TCAGTTATTG GCTGATTATG CCGATGTATT GGCTAGCAAT
GCCAACGGTA GTTTTGCTGG AAAGCCCCTG CAGTTAATTA ATCAAGCTTT AAAGCTAGAC
CCCGATAATT TAATGGCGCT TTGGTTTTCA GGAACTGCGG CTTACAATTC AGGCAATTAC
AAGGGTGCCG TGCAGACCTG GGAAAAGTTG GCAAACCAGA TTCCGCCAGA TACTGACGAG
GCCCGTGCTA TTCGAGGATC GATTTCTGAG GCGCGCGCTA AAGGAGGTCT CTCTTCATCT
GCGCCTGCTG CCGTGATGGG TAAAGTGATT AGCGGCAAGA TCGAATTGTC TGCCGAGTTG
AAGGCTAAGA TTAAGCTGGG TGACATTGTT ATGGTGATTG CTCGTAAGCC TGGTGAACGT
ATGCTAGTAG CAGTCTTAAA AGCGCCTGCT GCAGATTTTC CTATGAGCTT TACCTTGAAT
GATGCCTTGG CAATAAATCC AAGTGCACCA CTCTCGCAAT TATCTGAGGC AAGTATCGAG
GTGCGTATCT CGAAAACTGT AATGGCTAAA CCGGAGGCGG GGGATTTAAT ATCCTCTGCG
CAGACGGTTA AAGTGGGCAC AAATAGCGTG CGTTTACTGG TCGATCAAGT TCGTCAATAA
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| Protein sequence | MILVTSFLVF AFLLLVLVLV LVLRPFLFPA KSKATSRRQM NAAIYREELD KLEAEHRDGV
INSADYEISH AEMRQRLFQD TIEEDDRVIA GSAKKTAIEL CIFIALLSSV LYFSLGDVVR
IAQRNSERPV TQEGVEKMVA EFAIKMEKDP GNLKGWAMLA CSYRILGRNE DAAKAYARAG
NYIDSDPQLL ADYADVLASN ANGSFAGKPL QLINQALKLD PDNLMALWFS GTAAYNSGNY
KGAVQTWEKL ANQIPPDTDE ARAIRGSISE ARAKGGLSSS APAAVMGKVI SGKIELSAEL
KAKIKLGDIV MVIARKPGER MLVAVLKAPA ADFPMSFTLN DALAINPSAP LSQLSEASIE
VRISKTVMAK PEAGDLISSA QTVKVGTNSV RLLVDQVRQ
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