| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0923 |
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| Symbol | |
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| ID | 6184239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 799189 |
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| End bp | 800334 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671553 |
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| Product | alanine racemase |
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| Protein accession | YP_001797735 |
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| Protein GI | 171463622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.288368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAA AACATGAAAG GAGGGGGATT TTGGGTGAAT CTGCTAACGG CCTGATTAAT
AGACCAATTT TGGCGTCTAT TCATACAGCC GCCTTTCAGC ATAATTTAAA CCGAGTGCGC
GAGATGGCGC CTGAATCCAA GATTTGGTCT GTCATAAAGG CGCGTGCTTA TGGTCATTGC
TTTGATGCTG CCCTGAAGGG CTTGATATCA ACCGACGGTT TTGCCTTATT GGATATTCAA
GACGCTGCTT GGTTGCGCGA GCATGGCTGG AAAGGCCGAA TCCTGCTTTT AGAGGGATTT
TTTCATGAAA ATGAGCTCAG CCGTGCTGAA GAGTTGGCTT GCGACTTAGT GGTCCATTGC
GGAGCGCAGG TGGAATGGCT AGAGAGTTTT AAAGGCAAAA ACCGCAAACC ATTTAATGTC
TTTCTGAAGA TGAATACCGG CATGAATCGT CTGGGCTTTA AACCAGATGA TTACAGGACT
GTATTTCATC GCCTGCACGC TGCCGGATAT CATATGCACC ACATGACCCA TTTTGCAAAT
GCAGATCAGG TGAATCGAAT TCCATCGGTT GGCAGTCAGC AGGAATTATT TAATCAAACC
ATTGAGGGTT TGGAGGGCGC TACCTCTTTG GCTAACTCAG CCGCTATTTT GTGGCATCGC
AATGCATTGG GGGATTGGGT GCGTCCTGGC ATCATGCTTT ATGGCGTTTC TCCTACTGGC
TTGCATGCCG ACATTGAGCA TTCAAACCTT CAAGTGGTCA TGCAGCTCCA TAGCGAAATT
ATCGATATTC AGGATCTGCA AAAAGGAGAT CGCATTGGTT ACGGTGGTCG CTATGAGGCT
CCTGAAGCCA TGCGCATCGG GATTGTGGCA TGCGGTTATG CAGATGGTTA TCCACGTCAT
GCTAAAGATG GAACCCCCGT ATGGGTTGCT AATGGCGACC ACGGAGTGAT ATGTCCTCTG
GTGGGCAGAG TGTCGATGGA TATGTTAGCG ATTGATTTGC GCCATGCACC CAATGCAAGC
ATTGGTACTA CTGTTCAGCT ATGGGGCGAT AAGGTGCCAG TTGATGATGT TGCTCAAATG
AGCGATACGA CTGGTTACGA GTTGCTGTGT GCGGTGGCAC CAAGAGTTCC GGTTGCCATC
ATATAA
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| Protein sequence | MQLKHERRGI LGESANGLIN RPILASIHTA AFQHNLNRVR EMAPESKIWS VIKARAYGHC
FDAALKGLIS TDGFALLDIQ DAAWLREHGW KGRILLLEGF FHENELSRAE ELACDLVVHC
GAQVEWLESF KGKNRKPFNV FLKMNTGMNR LGFKPDDYRT VFHRLHAAGY HMHHMTHFAN
ADQVNRIPSV GSQQELFNQT IEGLEGATSL ANSAAILWHR NALGDWVRPG IMLYGVSPTG
LHADIEHSNL QVVMQLHSEI IDIQDLQKGD RIGYGGRYEA PEAMRIGIVA CGYADGYPRH
AKDGTPVWVA NGDHGVICPL VGRVSMDMLA IDLRHAPNAS IGTTVQLWGD KVPVDDVAQM
SDTTGYELLC AVAPRVPVAI I
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