| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0771 |
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| Symbol | |
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| ID | 6184535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 665226 |
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| End bp | 666158 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671410 |
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| Product | polypeptide-transport-associated domain protein, ShlB-type |
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| Protein accession | YP_001797602 |
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| Protein GI | 171463489 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.891277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGCCA ATAACTACGG TTCGCGCTCT ACTGGAGCCA ACCAAGGCGT GCTTGCCTTA
AATTTTAATA ACCCAACTGG CATTGGTGAT CAAGCCTCCA TTAATGGTAT TTATTCGGAA
GGCTCCCAAT ATGTACAGGG CTCTTATTCA TTGCCGGTAT CAAGAGATGG CCTGCGTTTG
GGTGCCTCTG GAACTTATTT GAACTATAAG AACGTCAGCA ACTATGCAAC GAGCGCAGGT
GGTGGCTATG GCGATGCTTG GACCGGTGGC GTTAGCGCTG CTTATCCACT GATTCGTCAG
CAGGGTACCA ACGTCAATGC CAGCGTGAAC TATAACGTTA AGAGTTACTC CAATAGCAAT
CTCTACACCA AGCAAACTAT TAGTGACTAC AACATCAAAA ACTTAGGTTT TGGATTGTCT
GGTAGTTACT ATGATGGCTT TGGCGGTGGC GGTGTAAGTG CTGGAAGTGT TAATTTAGTC
TTTGGTAATT TAGATATTTT GGCTGCAGGT GCGGCTAATG GCTACGGTCA ATTTATGCCA
TCCACTTTTA CTAAATTTAC GTTTGCCGGC AATCACAATC AGCAATTGAC CGAAGATGGT
CAAACTTTCT TATACGTTGC GATGTCTGGG CAGTTAGCGT CTGTAGATCT CAATTCTGCA
GAGCAAATCT ACATGGGTGG TCCATATGCT GTGCGTGCTT ATCCAGTGGC GCAAGGCGGC
ATTGGCAATA TTGAATTACG TCACCAATTT CCTGAGCGCA TCACTGGCAC GCTATTCTTT
GACGTTGGCA TGGTGCAACA ATACAAATCC AATACCACTT ATGAGTTGCT TAAGCGCGGC
ACCAATGCAA GCAATACCTA CACTCTGATG GGTACAGGTT TTGGTGTTAA ATGGGATTAC
GAGGGCTGGA ACTTGGGTGC AATGGTGGCC TAG
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| Protein sequence | MEANNYGSRS TGANQGVLAL NFNNPTGIGD QASINGIYSE GSQYVQGSYS LPVSRDGLRL
GASGTYLNYK NVSNYATSAG GGYGDAWTGG VSAAYPLIRQ QGTNVNASVN YNVKSYSNSN
LYTKQTISDY NIKNLGFGLS GSYYDGFGGG GVSAGSVNLV FGNLDILAAG AANGYGQFMP
STFTKFTFAG NHNQQLTEDG QTFLYVAMSG QLASVDLNSA EQIYMGGPYA VRAYPVAQGG
IGNIELRHQF PERITGTLFF DVGMVQQYKS NTTYELLKRG TNASNTYTLM GTGFGVKWDY
EGWNLGAMVA
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