Gene Pnec_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0566 
Symbol 
ID6183882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp499668 
End bp500186 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content49% 
IMG OID641671241 
Productformate dehydrogenase, gamma subunit 
Protein accessionYP_001797437 
Protein GI171463324 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAT CATTTTCTAA AGTTCTACGC ACTTTGGTAG TGGCTGCTAG TTTGTCGCTG 
ACTTTGGCAA GTGGGATCAG TTTTGCTGAG CGCGCGCCGA TGGCGCCACT TCCGTCACCG
AGCGGGGTGG ATGTTTCACC TTTGTCAGTG CCAGCAAATC CCAGTGCCTT GGCAAATGGA
ACTCAAGCGC AGGCTCAGCC AGCAAACCCA TCGATTTTTA CTTCCGCGAA TAGCGATCCC
TATAACTATG TCAGCATTCC AGACAAAGAA GCTAGCGTTT TAATTCAGCG CTCTGGTCAA
CAGTGGCGTG TGATTCGTAA TGGTGTGATC ACTGTGTTCG GCGATTGGTT GCTCGCATTG
GCATTTTTCG GGATTATTGC AACCTACACG CTCAAAGGCC CTATGAAGTT ACATGAGCCA
ATGTCTGGTG TAAAGATTAA GCGCTTCAGT GCCTTTGATC GCCTAGTTCA CTGGTTGATG
GCATTTAGCT TTTTAGCATT GGCTTTCACT GGCCAGTAG
 
Protein sequence
MKRSFSKVLR TLVVAASLSL TLASGISFAE RAPMAPLPSP SGVDVSPLSV PANPSALANG 
TQAQAQPANP SIFTSANSDP YNYVSIPDKE ASVLIQRSGQ QWRVIRNGVI TVFGDWLLAL
AFFGIIATYT LKGPMKLHEP MSGVKIKRFS AFDRLVHWLM AFSFLALAFT GQ