Gene Pnap_4978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4978 
Symbol 
ID4686034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008762 
Strand
Start bp4501 
End bp4917 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content58% 
IMG OID639826806 
Producthypothetical protein 
Protein accessionYP_973968 
Protein GI121583549 
COG category[K] Transcription 
COG ID[COG5499] Predicted transcription regulator containing HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones106 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGC ACTCTATCCA AAATGAGGCC GACTACAAGG CCGCGCTCAA GATCGTTTCT 
GCTTTGGTGG ACGTAGATCC ACAACGCGGC ACATTGGAGG CCGACCGCCT TGAAGCGTTG
GGCTTCCTGG TGGAGGCTTA TGAAAGCGGC CTTGCCAAAT CAATGCTGCA AGGGGGAAAT
TTGGAGAGTG CAATGGGCCA TGACGGCATC GACCATTCGC TCTACACGCT GGCCGACTAC
CCGGTGCTGG CTGCGCTGGC GCAGGAGAGG ACAAGCGCAA CCAAGCTGGA CGGCAGGGCA
TGCCGTTTTC TCTACACTGA AGCTGGGTCT CGGATGGATG GGACAACAGT GTCAGCCCAG
GAGATTGCGT TCATGCGAGC GCTGGAGGTC GATGTTCGTG GAGTCACCCC ATGCTAG
 
Protein sequence
MNMHSIQNEA DYKAALKIVS ALVDVDPQRG TLEADRLEAL GFLVEAYESG LAKSMLQGGN 
LESAMGHDGI DHSLYTLADY PVLAALAQER TSATKLDGRA CRFLYTEAGS RMDGTTVSAQ
EIAFMRALEV DVRGVTPC