Gene Pnap_4721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4721 
Symbol 
ID4685912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp102528 
End bp104099 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content62% 
IMG OID639826711 
ProductFAD dependent oxidoreductase 
Protein accessionYP_973874 
Protein GI121583443 
COG category[S] Function unknown 
COG ID[COG4529] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.450266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATG GGGTCGAGCA AAGCGGTGGT CATCCTGGCA TCCCCGAAAA CGCTATGGAG 
CACACAGTGT TGCCTGATAA ACCGAGCCAT ATTGCCATTG TCGGAGGTGG CTTCAGCGGT
GTCTGTGCGG CGGTCCAGCT GGTGAGAAGC AGCCCAGCAC CTTTGCACAT CACCCTCATC
GAGCCCCGTG ACCGGGTTGG CCTGGGCCTG GCCTATTCGA CCACCGATCC CGATCACCGC
TTGAATGGTC CGACCTGGGT TCACTCCATC GACCCTCAGG ATTCAGGGCA TTTCACGCGA
TGGTGTGAAA AGCAAGGCAT CTTTTCGGCC GACTCGCAGG CGCTGCTGCC CGATGGCAGC
GCTTTCGTGC GGCGTGCAGA CTTTGGCAGG TATATGGAAT CTGCCTTCCG TGAACACGCT
CAATGGCCAG CGACGCAATC GACCATCACG CATCTTCGAG CCCGCGCAGT CGATGCGTTG
GAAAAAGGCG ATTCGGTCGA GCTGGTGACC GATGCAGGAC ACTCACTGGT GTGCGACCTG
CTGATCATCG CCACCGGCAA TCCGCAACCG AGGCTGCAAG CGCCGCTGGA TGCCTCGCTG
GCGGCACATC CCGGGGTTGT TGAAAATCCG CTCGACACCC AACGGTTGCT TGAAATTCCT
GCTCAAGCCA GCGTCTTGAT CATCGGCAGC AGCCTGACGG CGCTCGATGT CCTGGCGACC
CTCCTGCGGC AAGGGCACAC GGGCAAGATG GTGAGCATTT CAAGACGCGG ATTGCAGCCA
CGTCCCCAGG CGCCCTCTGC CGGCCCCCTT TCACCGCCCC CGACCGTGCC GGTTGCGCCT
GCAACGGCCA CGGGCCGCCA GATGCTGGAT CGAATCCTGG GGCCGGCGCC GGACTTTCTC
ACGCAACCGG GGGTTGAGCC CACGTTGCGA GCCTGGATCC GGGCGCTTCG ACAGCGTATT
GGGGAGGTCC AGGCGCAGGG CGCAAGCTGG CACTTGGCCT TTGATGAGCT GCGCGACGTG
GTGTGGCGGA CCTGGCCCCT GTTGCCCACA GCGGAAAAAC GACGATTTCT CAAGAAAGCG
CGGACCTGGT ACGACGTGCA CCGCTTTCGC TCGCCGCCAC AGACGCAAAG CCTGGTGCAG
GCTGCGCAGG CGCAGGGTCG CATCGAGTTC AGGGTGGATC GAATTCAGTC AGTGGCTGCG
CTTGAAGCAA GCGGCCCGCT GCGGGTTTGT TTTGCGCCCA GACAGGGCAA TGCCAAGCGG
TGCGAAGCGT TCGAGGTCAT CATCAATTGC ACGGGCCTGG ACGTTCTGGC GAGGGTTTCA
TCGAATCCAT TTCTGTCTGC CTTGATGGAC AAGGGCTGGC TCACTCCCGA TGCATGCGGT
ATCGGCTTCG CGGTCGATGA GCATTGCCGG GCGTTGACCG CCAAGGGCAC GAAACAACGG
GCAGTCCGCG TGATAGGGCC GCCAACAGCG GGTACCTTTG GGGATCCGCT CGGAGCGATG
TTCATCGCCG CGCAAATCTA CCGCATCGTT CCTGATGTTT TGAGCAGCCT GGAGGCAAGC
CGCATGCGCT GA
 
Protein sequence
MRDGVEQSGG HPGIPENAME HTVLPDKPSH IAIVGGGFSG VCAAVQLVRS SPAPLHITLI 
EPRDRVGLGL AYSTTDPDHR LNGPTWVHSI DPQDSGHFTR WCEKQGIFSA DSQALLPDGS
AFVRRADFGR YMESAFREHA QWPATQSTIT HLRARAVDAL EKGDSVELVT DAGHSLVCDL
LIIATGNPQP RLQAPLDASL AAHPGVVENP LDTQRLLEIP AQASVLIIGS SLTALDVLAT
LLRQGHTGKM VSISRRGLQP RPQAPSAGPL SPPPTVPVAP ATATGRQMLD RILGPAPDFL
TQPGVEPTLR AWIRALRQRI GEVQAQGASW HLAFDELRDV VWRTWPLLPT AEKRRFLKKA
RTWYDVHRFR SPPQTQSLVQ AAQAQGRIEF RVDRIQSVAA LEASGPLRVC FAPRQGNAKR
CEAFEVIINC TGLDVLARVS SNPFLSALMD KGWLTPDACG IGFAVDEHCR ALTAKGTKQR
AVRVIGPPTA GTFGDPLGAM FIAAQIYRIV PDVLSSLEAS RMR