Gene Pnap_4657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4657 
Symbol 
ID4685952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp43355 
End bp43936 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content50% 
IMG OID639826652 
Productstress protein 
Protein accessionYP_973815 
Protein GI121583384 
COG category[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.325263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.761079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA ATCTGCAAAA AGGTCAGAAG ATATCCCTTG ACAAAGAGGC TGGTGTCAAA 
CTGACAAAAA TCATCATGGG ATTGGGCTGG GATGCCGTCA AATCAAAAGG TTTTTTCGGC
ATCGGTGGCT CGACGCCAGA TATTGATCTT GATGCATCCT GCATCATGTT TGACGAGCAG
GGTACCCAGA TTGATTCAGT GTGGTTTCGT CAATTGAAAT CCAAAGACGG CTCCGTCATT
CACACCGGTG ACAACCGAAC TGGCGACGGC GACGGGGATG ACGAGCAAAT TATTGTGGAT
CTGACTCGCG TGCCTGAACG CGTGAAAAGC CTGGTGTTTA CTGTCAACAG CTTTACCGGG
CAGAACTTCT CAAAAATCGA AAATGCTACC TGCCGCATCG TCAATGCCGG CAACAACAAG
GAAGTTGCCC GCTTTAACCT GACTACCTTG GGCGCCCATA ACGCACAGAT CATGGCCAAG
ATTTACCGTC ATGGAAGCGA ATGGAAGATG CATGCGATCG GCGAGATTGG CAATGGCCGC
ACTTTTGAAG AACTGATGCC GCAGATCACC CCACACTTGT AA
 
Protein sequence
MAVNLQKGQK ISLDKEAGVK LTKIIMGLGW DAVKSKGFFG IGGSTPDIDL DASCIMFDEQ 
GTQIDSVWFR QLKSKDGSVI HTGDNRTGDG DGDDEQIIVD LTRVPERVKS LVFTVNSFTG
QNFSKIENAT CRIVNAGNNK EVARFNLTTL GAHNAQIMAK IYRHGSEWKM HAIGEIGNGR
TFEELMPQIT PHL