Gene Pnap_4626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4626 
Symbol 
ID4685826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp14401 
End bp15390 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content56% 
IMG OID639826626 
Product4,5-dihydroxyphthalate decarboxylase 
Protein accessionYP_973789 
Protein GI121583358 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4521] ABC-type taurine transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC TGCAACTCTC CGTCGCCATG GGCGACTATG ACCGCACCCG CGCCCTTTAC 
GACGGCAGGG TGTTGATCGA CGGTGTGGAC TCGATCTTCA TGTTGCTGAA CCCGGAGGAA
ATGTTCTTCC GCGCGATGCG CAGCATGGAT TTCGACATCG CTGAACTGTC CTTTTCCAGC
TACCTGGTAA AGCATGCCAA AGGCGAATGC CCCTACATCG CTGTGCCAAT CTTCTTGTCT
CGAGCCTTCC GCCACACCTC GATTTACGTG CGCAAAGACC GCATCGCCAA GCCAGAAGAT
TTGAAGGGAC GCCGTATTGG TGTGCCTGAA TACCAATTGA CCGCCAACGT TTGGGCCCGA
TCCATTCTGC AGGACGATTT CGGCGTGCGA CCCGAGCATG TGACTTGGGT CCGCGGCGGT
ATCGACACCC CGGGCCGTCC TGAAAAAATC AAACTGAAAT TACCGCCTGA AGTACATGTC
GAGGCCGCCC CTGATGGCAC CACCATTTCT GAGCTTCTCG ACCGCGGCGA GATTGACGGC
TTCATTGGCC CACGCCCGCC CAGCGCGTCA GTGCTGAAAA ACCCCCACAT CGGTTGGCTC
TTCGATGACC CAACCGCGGT GGCCAAGGAC TACTACCGGC GAACTGGCAT CTTTCCCATC
ATGCATGTTG TCGGTATACG CAAAGAACTG GCTCAACAAC ACCCTTGGTT GCCAGGCGCC
GTGGTGAAGG CCTTTACCCA ATCCAAAGCG GCTGCGCTGG CGCTGCTTGG CGACACATCA
GCGACCAAAG TTACTTTGCC GTTTGTGGAA GAACAACTCA AGGCAGCTCG CGAGACCATG
GGTGAAGACT ACTGGTCTTA CGGCGTGGCT CCTGCACGTA AAACGCTGGA AGCGTTTGTT
CGACACCATC ATGCACAAGG CTTGTCTGAA CGATTGGTGG GCGTGGAGGA GCTTTTCCAT
CCGTCCACCT ATGAGAGCTA CAGCATCTGA
 
Protein sequence
MNKLQLSVAM GDYDRTRALY DGRVLIDGVD SIFMLLNPEE MFFRAMRSMD FDIAELSFSS 
YLVKHAKGEC PYIAVPIFLS RAFRHTSIYV RKDRIAKPED LKGRRIGVPE YQLTANVWAR
SILQDDFGVR PEHVTWVRGG IDTPGRPEKI KLKLPPEVHV EAAPDGTTIS ELLDRGEIDG
FIGPRPPSAS VLKNPHIGWL FDDPTAVAKD YYRRTGIFPI MHVVGIRKEL AQQHPWLPGA
VVKAFTQSKA AALALLGDTS ATKVTLPFVE EQLKAARETM GEDYWSYGVA PARKTLEAFV
RHHHAQGLSE RLVGVEELFH PSTYESYSI