Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4442 |
Symbol | |
ID | 4685649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008758 |
Strand | + |
Start bp | 2160 |
End bp | 2741 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639826296 |
Product | hypothetical protein |
Protein accession | YP_973461 |
Protein GI | 121583020 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.520896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.812467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGCCC CCTTGTATTT GCACAAGCTG CCGCTGCTCG GCGACCTGTT CGCTTTTTTG AACAGCGGCA AGCACCTGAA CCGGATGGCC GAGCCGCAGC TGTGGGCTGA GCTCGAGCGT GAACAGGACG CTTACCAGCG GCTTTTCGTC AGCCTGGGTT CCGCGCTGCG CATCGATGCG CGAGGCTTTG CCTGGTTTCA TGTGGACGAC GCCAGCAGCA ACGTTTCCAA GACCACGCGC CAGCTGGCAC TCCTGTTCAT GCTGATCTTC GAGTTCCAAG CCGACCTCGG GCTTCACCTA GGGCGCTTCA CGGACTGGCT GGTGGACGGC GCTTTGCTCG ACGCGCTGCT GGAGAAAAAC CGCCTGCTGC TCGAAGCCGA AGGCCTGGGC GAACGGGAGC AGCTCGAGCC GCTGCTGCGC ACGGCGAGCA ACTACGGGTT CGCTACGAGC GAAGGGAGCA GCGGCTGGCG CATCCTGCCG GCGGTGTTCC GATATCTTGA CCGCTTTGAG GCGCTGACGC GCACAGCCAG CCAAAATGAA GAAGTCATCC CACAACCACC TGCCACCAAG GAGGTGGCAT GA
|
Protein sequence | MTAPLYLHKL PLLGDLFAFL NSGKHLNRMA EPQLWAELER EQDAYQRLFV SLGSALRIDA RGFAWFHVDD ASSNVSKTTR QLALLFMLIF EFQADLGLHL GRFTDWLVDG ALLDALLEKN RLLLEAEGLG EREQLEPLLR TASNYGFATS EGSSGWRILP AVFRYLDRFE ALTRTASQNE EVIPQPPATK EVA
|
| |