13 homologs were found in PanDaTox collection
for query gene Pnap_4442 on replicon NC_008758
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008758  Pnap_4442  hypothetical protein  100 
 
 
193 aa  388  1e-107  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.520896  normal  0.812467 
 
 
-
 
NC_008782  Ajs_3601  hypothetical protein  55 
 
 
204 aa  182  2.0000000000000003e-45  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1264  hypothetical protein  47.46 
 
 
189 aa  162  3e-39  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4778  hypothetical protein  35.6 
 
 
233 aa  82.8  0.000000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.920095  normal  0.11895 
 
 
-
 
NC_004578  PSPTO_0989  hypothetical protein  36.69 
 
 
235 aa  82.4  0.000000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0694  hypothetical protein  37.28 
 
 
235 aa  80.5  0.00000000000001  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0854  hypothetical protein  36.69 
 
 
235 aa  80.9  0.00000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.310272 
 
 
-
 
NC_009512  Pput_0726  hypothetical protein  37.28 
 
 
235 aa  80.5  0.00000000000001  Pseudomonas putida F1  Bacteria  normal  0.153987  normal  0.122971 
 
 
-
 
NC_010501  PputW619_4491  hypothetical protein  36.69 
 
 
235 aa  80.5  0.00000000000001  Pseudomonas putida W619  Bacteria  normal  0.297213  normal  0.539779 
 
 
-
 
NC_010322  PputGB1_0726  hypothetical protein  37.28 
 
 
235 aa  80.1  0.00000000000002  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61980  hypothetical protein  35.5 
 
 
231 aa  79  0.00000000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0638922 
 
 
-
 
NC_009656  PSPA7_5392  hypothetical protein  34.91 
 
 
231 aa  78.2  0.00000000000007  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0980  hypothetical protein  36.9 
 
 
230 aa  76.3  0.0000000000002  Pseudomonas mendocina ymp  Bacteria  normal  hitchhiker  0.000356593 
 
 
-
 
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