Gene Pnap_4441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4441 
Symbol 
ID4685648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008758 
Strand
Start bp850 
End bp2157 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID639826295 
Producthypothetical protein 
Protein accessionYP_973460 
Protein GI121583019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0268222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCAACC CCCGCAGCCT CATCCACGCA CTGCATGTGC ACTGGGACAC CATCGAACGC 
CTGGTGGTGC TGGGGCGCGA CTTTCCGTCG TTCGATCCCG CGCAGATCGC TGACATCATT
CGCCGTCATT CCCCCGGAAA AAGCCTGGAC GATTGCGAAG CAGCGTTGCG GCAGATGGCT
TCATACGAGT TGCTGCAGGT CATGCCGCGC GGATCGGCCC TGCAGATCAA CCCCCTGGTG
CTCGAGTTCG TTCGCGGCCT GACCCGCGAG CACGAACTCG GCCTGTCGGC GGTCCTCAAG
GCGCGCGTGG ACGCCATCCG CAGCGCCACC GGCAAGCTGA CCGAAGCCCT GCAGTCGCGG
GACTCGGACC AGCTCCGGCA AGCGGCCGCC CAGCTGGCCG AACTCTTTCG CCAGATCGGC
CGGCAGCTGG ACCAGGACCG GCATGCGATT CTCGAGCTCA CCGAACGCGC CAAGTCCAAG
GATGCCAATT TGCCCATCGG CCGGCGCTAC AGCGAGGTGC TAGCTGCCTT TGACGACTAT
GTCGCGCCAA TGGCCGAGAT GATGGACAGC GGCCCTGCGG GCACGTTCTA CCGCCACCTG
GAAGACGCCG AGCATGCCCT GGACCATGCG GTCGAGACGC TGACCGCCCA GGGCGCGCTG
TACACCCAGC GTTTGTCGAT GCGACAGGTG GCCTTTCAAG CCAAGGAACT GCGCCGGCTG
GGCCGGGAGG TGCTCAAGCA CTGCAGCGAC ACGCTGCTAC CCCTGCGGGA AGAAATCCGC
CAGCACAATG CCCTGTCGAC GGCCATCAGC CAGTTGCTCG GCCGGGTGCG CAAGCGCGGC
CTGAATGCCA CGCTCGGCGC GGCCGATCTG CCGGTGTGGC GCCGGGACAT GCCGCGCCGC
GTGACGGTGG GCGATGAAGT GCTAAGCATC ATGGCCCAGG CGCTGCATTT CGAGCCCGCC
ACACTGGCTT TTCCCGAGGA GCGCGAAGAC GGCGCGGCTG CCCCGATGGA GCGCGTGGAC
GAAGCAGCGG TCTTGCGACG CTTGCGCCAG GACCTGCCGG TGAGCAGCCT GCTGCAATGG
CTCCACCAGC ACTTTGCCAA GCTGAGCGAC GGCACGCTGT TGCGGCTCTA CCACCAGCTG
ATCGAGCTAC GCGAGTGGGA CGTCACTGCG GCCGACACCC CCGTGGTCCA GCGCCTGCAC
ACCCTGCGCG TGCGCCACCA CCCGCACGCG CTCAGCCGCG CAGGTGCAAC TGCTGCGACG
GCTGCGACTG CGCCAACGCC TCCCCTAACG TCTTCACATC AGGCCTAG
 
Protein sequence
MTNPRSLIHA LHVHWDTIER LVVLGRDFPS FDPAQIADII RRHSPGKSLD DCEAALRQMA 
SYELLQVMPR GSALQINPLV LEFVRGLTRE HELGLSAVLK ARVDAIRSAT GKLTEALQSR
DSDQLRQAAA QLAELFRQIG RQLDQDRHAI LELTERAKSK DANLPIGRRY SEVLAAFDDY
VAPMAEMMDS GPAGTFYRHL EDAEHALDHA VETLTAQGAL YTQRLSMRQV AFQAKELRRL
GREVLKHCSD TLLPLREEIR QHNALSTAIS QLLGRVRKRG LNATLGAADL PVWRRDMPRR
VTVGDEVLSI MAQALHFEPA TLAFPEERED GAAAPMERVD EAAVLRRLRQ DLPVSSLLQW
LHQHFAKLSD GTLLRLYHQL IELREWDVTA ADTPVVQRLH TLRVRHHPHA LSRAGATAAT
AATAPTPPLT SSHQA