Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4359 |
Symbol | |
ID | 4685198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008757 |
Strand | - |
Start bp | 268848 |
End bp | 271103 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639826216 |
Product | UBA/THIF-type NAD/FAD binding protein |
Protein accession | YP_973381 |
Protein GI | 121582939 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
TIGRFAM ID | [TIGR02256] integrative and conjugative element protein, VC0181 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.369911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.849345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGG AGTACCACGA ACTCACGAAT GTCAGTGCGC TTGCGGATGA AGTAGGACTG ACGATCCCGC GAGCCAAGAC GTTATTCGAT GTCGTCTCGC GGCAGCGCGA CTACGCGGTG GTCCAGCTCC TGCAACACTG CGATGACGGG ACTCCGAAGC TTGAATGCAT CGTCGTCGAG GTCGAGTGCG ATGGTGTGCC TCCAAAAAAT GGCGTCGGCA TCAATTATCG GGAACGCTTG GCGCTATGTG TGTCCGACGA TCCCAAGCAG CTCATCGAGG TTCTGGCAAT GCGCAAGGAC TTCCCTGTTT TGATGCACCA GAACCAGGGC ATCCTCGATG CCCCTGCGAG CCTTTGTCTG TACTTCGAAT CCGTGGCGGC GGTGATGCGC ACTTGGACAC CGCAAAGTTT TTTGCGCCGA ATCCAGTGGT GGCTCGAAAA GAGTGCACGG GGTGAACTGC ACCCGACGGA CCAGCCGGTT GAACATCTGT TCTTCGCTAC CAGATACGAA CTCGTTCTGC CGTGGAATCT GTCAACGTTA CGCAAAAGTG CTGAGCATCG CTTCGTCATC GCGCGAGGCC CCGAGCGTCC CGACGCGGGC TTCACGTGCT TCCTGGAAGC GGTCCCTAAA GATGCTGCGG TCAAGACCGG CACCGCCGCC CCCATCGAGT TGGTGCTGCA ACCGATCCTG CACGGGTTCG TCGAGCGCGA TCCAGCGACA TTGGGACAAC TCGCTGACAT TCTTTCCAGG CGTGGCATCG ATCTCCTGCC CTACTTGCGA GCAGCCCTGC AGGCGCGCGT GGGCGCCAAG GGCGTCGTCG CATCGGCCGA CGACAAATGC ACGGTCATCC TGCTCCATAT CCCCATCTGC CGGACCGAAG GCGCAGAGCC CGTCGGCGTT ACCCATCGCG CGTTCCTGCT GCTGGCAGGC GGACTGGAAC TCGGCGTCGC CGTCGGCGCA TTGTTCGTCC TCGACAAGAA GTATTTCAGC GCAACGGGGC TGATCGGTGC GCAGCCTGCC ACCGAGTGGC GTTCGCAGCC TGTTTTGCCG ATGGCCGTCC TGAGCCAAAA CGACGCAGCG GCAGCGAGGA AGCAGTCGGG CATCACCGAG GAAGGACCGG CCGGCGCGCT TGTTGGCGCA GGTTCCCTCG GCAGCGCGAT ACTCAATTTT TGGGGACGCG CTGGCTGGGG AAGCTGGACC GTCATCGATA AGGACCATAT CAAGCCGCAC AACCTGTCTC GGCATGTGGC CTATGCGCAG CACATTGGAT ACCCCAAGGC CACCGTCGTG GCGGACCTAC ACGCGGCGGC CATGCATGGG GCCTCCGAGA TCACCCCACT GAACGCCGAT GCCAGTGACT TCAAGCCTGG GGCGGTCACT GATGCACTGT CAAGTGTGAA GCTAGTGGTC GACGCCTCGA CGACTCTGGA ATATCCGCGC GCCGCAAGTA TGGTCGATGG CTTCGCCAGA CACTTCTCGG TCTTCGTCAC ACCAACCGGC AATGCAGGAA TATTACTTGC CGAAGACGCC CAACGGCTTC TTCGCCTGCG TACTCTTGAA GCGCAGTATT ACCGCGCCTT GATCCAAGAG AACTGGGGAC GAAACCACCT CACCGACAAC ACTGGTTCGT TCTGGAGCGG CGCGAGCTGC CGGGATATTT CTGTGGTCAT ACCGTATTCG CGGATCATGG GCCAGGCCAG TACACTGGCC GAGCAGATTC CATTGGCGGC AGCGCAAGAC GGCGCAATGA TTCGCGTATG GCAGCGCGAT CCAGTTCGTG GCACCGTGGA GGTGCACGAC GTGCCTGTGG CCACTGAACG TCGCATGCAG CTCGGTGAAT TCGATCTGTT CGTCGACGCC AGCGTAGAGC TGCAACTTCG GGACTTGCGG ACGAAGGGAT TTCCCAATGA AACCGGCGGC GTGTTAATCG GGTATTACGA TTTCAACGTC AGTGCCGTCA TCGTAGTCGC GGCCCTTCCT GCTCCGCCTG ACAGCAAGTC CAGTCCTGGC TCATTCGAGC GCGGCATCGC TGGTCTGGCA GAAACGGTCA CCGAAGCGTC TCGACGGACA GCCGGAGTCG TCGGCTACAT CGGCGAGTGG CACAGCCATC CACCTGGGCA TTCCGCCTCA CCCAGCCGTG ACGATCTCGT GCAACTCGTT CATCTGGCCT TGGGCATGGC CGATGACGGT CTCCCCGCCG TTCAGCTCAT CGTCGGTGAA CACGATCTGC AAGTCTTGCA AGGCACGGTG AAGTGA
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Protein sequence | MAEEYHELTN VSALADEVGL TIPRAKTLFD VVSRQRDYAV VQLLQHCDDG TPKLECIVVE VECDGVPPKN GVGINYRERL ALCVSDDPKQ LIEVLAMRKD FPVLMHQNQG ILDAPASLCL YFESVAAVMR TWTPQSFLRR IQWWLEKSAR GELHPTDQPV EHLFFATRYE LVLPWNLSTL RKSAEHRFVI ARGPERPDAG FTCFLEAVPK DAAVKTGTAA PIELVLQPIL HGFVERDPAT LGQLADILSR RGIDLLPYLR AALQARVGAK GVVASADDKC TVILLHIPIC RTEGAEPVGV THRAFLLLAG GLELGVAVGA LFVLDKKYFS ATGLIGAQPA TEWRSQPVLP MAVLSQNDAA AARKQSGITE EGPAGALVGA GSLGSAILNF WGRAGWGSWT VIDKDHIKPH NLSRHVAYAQ HIGYPKATVV ADLHAAAMHG ASEITPLNAD ASDFKPGAVT DALSSVKLVV DASTTLEYPR AASMVDGFAR HFSVFVTPTG NAGILLAEDA QRLLRLRTLE AQYYRALIQE NWGRNHLTDN TGSFWSGASC RDISVVIPYS RIMGQASTLA EQIPLAAAQD GAMIRVWQRD PVRGTVEVHD VPVATERRMQ LGEFDLFVDA SVELQLRDLR TKGFPNETGG VLIGYYDFNV SAVIVVAALP APPDSKSSPG SFERGIAGLA ETVTEASRRT AGVVGYIGEW HSHPPGHSAS PSRDDLVQLV HLALGMADDG LPAVQLIVGE HDLQVLQGTV K
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