Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4318 |
Symbol | |
ID | 4685312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008757 |
Strand | + |
Start bp | 227441 |
End bp | 228844 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639826177 |
Product | DNA repair exonuclease-like protein |
Protein accession | YP_973342 |
Protein GI | 121582900 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.677923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAG GAAAATACGC AGGGAACACC GTGCGGGTGG CTCAGATGAC AGACTTGCAC TACTGTGCAA CCAACCTTGA AGAATCGGAT CGATGCTTCA CTGCGGCGGT CACAGATGCG ATCGAGAAAC AAGTCGATTG CGCCCTGATT ACCGGCGACA GCACCGATCA TGCGATGGAC GCCCACAGCC CGGCTTTCGT GGCGCTGGCC AAGCAAGTCC AACGGCTTGC CAACCATTGC CCGGTACTCA TGCTGCAAGG CACCTTCAGC CATGAGCCAG TTGGGCTTCT CAAGGTACTT TCTATGGTCG GGGCAAAATT TCCGATCATG ATTGCAGAGA AGATCAGCTC GTTCGGATTG ACCAAGTCGA AAGGGTTTGA ACTGATCATC CCCAACAACG ACTATCGCCT GGTATGCACG GCTATACCGA CGCTCAACAA AGCCGATATT GCGGCCATGA CCGAGGACAG TGTGGGCGCT GCGGCAGAAG AAGCAGGGCG GATCATTTCG GACCTCCTGG CCAGCCTGGC GCCTATGAAC AGGGCCCTGC GCCTACAGGG AATTGCGTCG ATGGTGATCA GCCACGGCAC GGTGATGAAC TGCCTGACAG AGCACGGCGT GCCCATGGCG GGTTTTGACC ACGAGTTCAC GGCCGGCTCG CTATTTTCAG CGGGCGCGGA CGCCGTAGCG CTGGGTCACA TTCACAAGCA TCAATCCTGG GAGAGTGATA CGCAGGGATT TCGCCAGACC ATTGCCTACG GGGGCTCAAT CGGGAGATTT CACTACGGCG AAGAAGATGC GAAGGTTTGG CTGGAATGGC ACATGACAAG CGGTCAGGCT TCGTTTGTGG CTTATGAAAC GCCGGCTCGT CGAACAATCG ATATTTTCTT TGACGGCCCG CCGGACATGG AAAAAATCCG TGCAGCTGCT GCTCAATGCG AAGGCGCCTT TGTTCGCGTT CGCTATGAGG TGGACGCAGA GCACAAGCAA AGCGTTGACC GCAATGCCAT CAAAGCCATC CTCGGGTCAG CCTTGCACAT CCAAATTGAA GGGACAACGC TGGCTATCGA GCGGGTGCGG GCCAAAGGCA TCAGTACAGA ACCATCGCTG GTCGGGAAAC TTGAAAAGTG GTGCGAGGCA ACTGGTACCA AAGTCGGCAT CCTGCCAGAG ATGCTGACCA TGATTCAGAA CCAGGACGCT CAAGCGCTGG TGGACAGTAC GATGAAACGG ATCATGCAGC AGGTGATGCC AGTGGCTGAA AAGCCCATTG AAACCGCTGC AGCTGAACCA GCCAAGCTTG CCACGGCGCC AGTTCCAATT CCAAAAGTTG ATGTCAAAAA AGAAACGATG AGTCGCGGTT TCTTTGAAGA TGACTTGGCG ATTGAGGATC GCACGCTATT TTGA
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Protein sequence | MTQGKYAGNT VRVAQMTDLH YCATNLEESD RCFTAAVTDA IEKQVDCALI TGDSTDHAMD AHSPAFVALA KQVQRLANHC PVLMLQGTFS HEPVGLLKVL SMVGAKFPIM IAEKISSFGL TKSKGFELII PNNDYRLVCT AIPTLNKADI AAMTEDSVGA AAEEAGRIIS DLLASLAPMN RALRLQGIAS MVISHGTVMN CLTEHGVPMA GFDHEFTAGS LFSAGADAVA LGHIHKHQSW ESDTQGFRQT IAYGGSIGRF HYGEEDAKVW LEWHMTSGQA SFVAYETPAR RTIDIFFDGP PDMEKIRAAA AQCEGAFVRV RYEVDAEHKQ SVDRNAIKAI LGSALHIQIE GTTLAIERVR AKGISTEPSL VGKLEKWCEA TGTKVGILPE MLTMIQNQDA QALVDSTMKR IMQQVMPVAE KPIETAAAEP AKLATAPVPI PKVDVKKETM SRGFFEDDLA IEDRTLF
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