9 homologs were found in PanDaTox collection
for query gene Pnap_4307 on replicon NC_008757
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008757  Pnap_4307  hypothetical protein  100 
 
 
475 aa  978    Polaromonas naphthalenivorans CJ2  Bacteria  hitchhiker  0.00962491  normal  0.170143 
 
 
-
 
NC_008786  Veis_3681  hypothetical protein  33.91 
 
 
509 aa  260  4e-68  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2562  hypothetical protein  25.77 
 
 
440 aa  107  5e-22  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.12356 
 
 
-
 
NC_007298  Daro_2239  hypothetical protein  29.83 
 
 
442 aa  105  1e-21  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.113568 
 
 
-
 
NC_008782  Ajs_1566  hypothetical protein  26.46 
 
 
427 aa  96.7  8e-19  Acidovorax sp. JS42  Bacteria  normal  0.0344341  normal  0.0272021 
 
 
-
 
NC_007972  Rmet_6221  hypothetical protein  25.61 
 
 
417 aa  82  0.00000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.551734 
 
 
-
 
NC_010553  BamMC406_6790  hypothetical protein  28.82 
 
 
436 aa  81.6  0.00000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.949242  normal 
 
 
-
 
NC_010682  Rpic_1634  hypothetical protein  25.95 
 
 
425 aa  81.6  0.00000000000003  Ralstonia pickettii 12J  Bacteria  normal  0.212569  normal 
 
 
-
 
NC_012849  Rpic12D_5275  hypothetical protein  25.95 
 
 
425 aa  81.6  0.00000000000003  Ralstonia pickettii 12D  Bacteria  normal  0.0969359  normal 
 
 
-
 
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