Gene Rmet_6221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6221 
Symbol 
ID4036659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp73029 
End bp74282 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content62% 
IMG OID637975247 
Producthypothetical protein 
Protein accessionYP_582030 
Protein GI94152628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.551734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCGC CCATCATTGG CAAGATCCGA CCCGGCATCA AGGTCCTCAC CAAAGCTGCG 
CGCGACAAGC TCGAAGCCGT GAAGATCCAC GATGCTGGTC TCGCGCGGGG CGACAGCTTC
GAGCGCATCG AAGGCGATAT CACGCGGGCG ACAGGCATCA AGACGCCGCT CGTGCCGAAA
AACGTTCCCT GGTTCACCTG CCGTGCATCT GACTTCGCCA ACCCGGCGTT GGCCGAAGAC
ATCGTCCAAC GCTACGGCGA AGATCGCAAC GACGGCAACG GACATCGCCT CTGGCGTTTT
CCCGTGGTCT TCGCGTTCGA CGACTGGCTG AGCAACATGC CCAACCAGCT CGTTGCATGG
ACGAAGAGCG GCAGGCAGTA CTTCTCGGAA TATGGCCGTG ACGGCAGGCG CTACTGCAAG
ATGTACGCAC CTCCGGTGCG CGATGAGCGC GCCAATCGTG CCAAGCGCAC CTGGGGCGGT
CGCACCGTCA TCCTGAGGCA GGACAATGAT ATTCAGGATG GATTGTGCGA TCCGCAGGAA
TGTCCCCAGT ACCAAGGCGG CCATTGCAAC CTGTCTGCGA GCTTCTTCTT CGCGATTCCG
CATATCTCCG GACTCGGGCT CATCGAAATG CCCACCACCT CGATTTACGT CCTGCAAAAA
GCCCACGCGG CTATGCAGAC CGTGGCAATG GCGCGAGGGC GGCTCGTAGG CGCCAAGTTC
TGGATGTCCA AGCAAGAGCT TGAGATCAGC CGCATCGATG ACACCGGCAA GCCGGTGCGG
CAGATGCAGT GGCTGATCAC GCTCGACGCC GAAATCGATA TCGCGGCATT GCTTGATGGC
TCGGATCGGC GCCCGCCGGC ATTGGAGATG GCAGAACAGG CCGTTTCCAT GCTGGAAGGG
GATAGGGAGG TTCGGCCCGA CCACGGGTCG GTCGATGACG GCACCATCGA GGCGCCGCAG
ACCGGTACGT CGGAAAGCGG CGTAGTTCAG TCCGCGGGTT CGGTGCCCCC ATCCGATACG
GCGGGTACTG AGGACCTGGA GAGCGAGTAT CTCGATCTCG TGAAGCGCCT TGGGCTCAAT
AGCGAGGACG GCGCCCGCCA GTTGAAAGCT TATGCAGCGG CGACCTTCGG GCGCGGCTGG
TCCAAGCGGG AACAGGATGT GCGGGGGTTC TTGGCTCAAC TTCGCACTGC GCTGACCAAG
CCCGCTGCCT TCCGTGAACA CGTAGCGGCT ATCGCCGCTG ACGTCGCTAC ATAA
 
Protein sequence
MRPPIIGKIR PGIKVLTKAA RDKLEAVKIH DAGLARGDSF ERIEGDITRA TGIKTPLVPK 
NVPWFTCRAS DFANPALAED IVQRYGEDRN DGNGHRLWRF PVVFAFDDWL SNMPNQLVAW
TKSGRQYFSE YGRDGRRYCK MYAPPVRDER ANRAKRTWGG RTVILRQDND IQDGLCDPQE
CPQYQGGHCN LSASFFFAIP HISGLGLIEM PTTSIYVLQK AHAAMQTVAM ARGRLVGAKF
WMSKQELEIS RIDDTGKPVR QMQWLITLDA EIDIAALLDG SDRRPPALEM AEQAVSMLEG
DREVRPDHGS VDDGTIEAPQ TGTSESGVVQ SAGSVPPSDT AGTEDLESEY LDLVKRLGLN
SEDGARQLKA YAAATFGRGW SKREQDVRGF LAQLRTALTK PAAFREHVAA IAADVAT