| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4171 |
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| Symbol | |
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| ID | 4685343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008757 |
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| Strand | + |
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| Start bp | 41133 |
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| End bp | 43094 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639826033 |
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| Product | hypothetical protein |
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| Protein accession | YP_973198 |
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| Protein GI | 121582756 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGC GCGGCAACTC GGATGGTGAA GACCGTTTTA GCATCCGGCC CGGCGCACCC
AAGCAGCGCG GCCAAGCCTT CGTCTCGCAG GTGCTGCGGC AGGCCAGCAA GGGGGCCAAC
TCGACTGGCC GCAAACCGGG AAAGACACCC GGATCACGTC TGGGGCGGGG CCATGTGGCT
GCGCGCTTCA CCGGGCAGTC GCTATCTGCG ACCTCTCGGC GTGCCACCGT CAAGGTGCGG
CTGGTCTACC TCAAGCAGGC CGGTGCGCGT TCAACCATCA CGCACCTGCG CTACATCGAG
CGCGAAGGCG TCGGCCGCGA GCAGGACGCC GGCAAGGCCT ATGGGCCAAT GACCGATGAA
GCGGACTTGC CGGCTTTCGA GGAACGTGGC CGGGAAGTTC GGCACCAGTT CCGCTTGATC
GTCTCGCCCG AGGATGCCGA ACAGCTCGAT GACCTGCGCA CCTACACGCG CCACCTGATG
GGCCGTATGG AGGCCGATCT GGGCAGCCGG CTGGACTGGG TGGCGGTGAA CCACTGGAAC
ACCGACAACC CGCACACGCA CATCGTATTG CACGGCAAGG ATGACACGGG CAAGGACCTC
ATCATTTCGC AGGCCTACAT CACCCGCGGC ATGCGCGAGC GCGCTGCGGA GCTGTCCACC
GAATGGCTGG GGCCGCGCAT CGAACTGGAG ATCCAGCGCA CACTGGTGCG GGAGGTCGAT
CAGGAGCGGT GGACCAGCTT GGACCGCACG CTGCAACGCG AGGCAAAGGA TGGGCTGAAC
CATGTGGATC AGCCGGCCAG CGATCCGAAT CTGCGACAGC AGCGCGTGCT ACTGGTGGGT
CGTTTGCAGC GGCTGCAACG CATGGGGTTG GCGAGCGAGC AACAGCCCGG CGTCTGGGTG
GTTCACGCCG ATGCCGAACC CGTGCTGCGA GCGATGGGCG AACGCGGCGA CATCATCCGC
ACCATGCAGC GGGCCATGGG AGGTGCGCAG CGCGACCTGG CCGTGTTTCA GCCAGGCCAA
GATAGCCGTT CCGTTATCGG CCGGGTAGCC GGTAAAGGGC TTGCGGACGA GCTGTACGAC
AAGGGCTATC TGGTAGTCGA TGGCATCGAC GGCAAGGCGC ACTATGTGGC GTTGCCTGCC
AAGATGGAGC TGGCGCAGTA CCCGGTCGGC ACCATAGTCG AAGCACGCGG TTCAGTCGAA
TTCCGGGCGG CTGATAAGAA CATTGTCGCG CTGGCAGTCG ATGGCCTCTA CCGTACCGAT
CATCACCTCG CCGTTGCCAA GGCGCAGGCC ACGTCCGGAC GCGATCCGCA CGAGGTGATC
GATGCACATG TTCGGCGGCT GGAGGCACTG CGTCGGGCTG GCATTGTCGA GCGCATCGCC
GAGGGCGTCT GGCGCGTGCC AGTGGAACTG CCTGAGCAAG GTCGGCAATA CGACATGCAG
CGACTGGGTG GCGTGTCAGT GGAGTTACGT TCGCATCTGC CCATTGAACG ACAGGCTTTT
GTGATCGGTG CGACATGGTT AGATCAGCAA TTGATCGGCG GAGCCAGCGG CATCGCCGAC
AACGGTTTCG GCGGAGAGGT ACGCAATGCG TTACGGCAGC GAGCCAACTT CCTGATCGAT
CAGGGACTGG CTGAACGACG CGGGCAGCGG CTAATCCTCG CCCGCAACCT GCTGGCGACA
CTGCGCGGCA GGGAGGTGGA GGCTGCGGGC GGGCGCATCG CGGCCGAAAC CGGCCTGGCG
CATCGGCCGG TGGCCGATGG CGAGCGCATC ACCGGCGTCT ACCGGCGCAG CGTCCAACTC
GCCAGCGGCC GCTTCGCGAT GCTTGATGAC GGCATAGGCT TCAGCCTGGT GCCGTGGAAG
CCAGTGATCG AGCAACGGCT GGGGCAGACT TTGACCGCCG TAGTGCGTGG TGGCGGGGTG
TCGTGGGAGT TCGGGCGGCA ACGCGGGCCG TCAATCGGCT GA
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| Protein sequence | MSRRGNSDGE DRFSIRPGAP KQRGQAFVSQ VLRQASKGAN STGRKPGKTP GSRLGRGHVA
ARFTGQSLSA TSRRATVKVR LVYLKQAGAR STITHLRYIE REGVGREQDA GKAYGPMTDE
ADLPAFEERG REVRHQFRLI VSPEDAEQLD DLRTYTRHLM GRMEADLGSR LDWVAVNHWN
TDNPHTHIVL HGKDDTGKDL IISQAYITRG MRERAAELST EWLGPRIELE IQRTLVREVD
QERWTSLDRT LQREAKDGLN HVDQPASDPN LRQQRVLLVG RLQRLQRMGL ASEQQPGVWV
VHADAEPVLR AMGERGDIIR TMQRAMGGAQ RDLAVFQPGQ DSRSVIGRVA GKGLADELYD
KGYLVVDGID GKAHYVALPA KMELAQYPVG TIVEARGSVE FRAADKNIVA LAVDGLYRTD
HHLAVAKAQA TSGRDPHEVI DAHVRRLEAL RRAGIVERIA EGVWRVPVEL PEQGRQYDMQ
RLGGVSVELR SHLPIERQAF VIGATWLDQQ LIGGASGIAD NGFGGEVRNA LRQRANFLID
QGLAERRGQR LILARNLLAT LRGREVEAAG GRIAAETGLA HRPVADGERI TGVYRRSVQL
ASGRFAMLDD GIGFSLVPWK PVIEQRLGQT LTAVVRGGGV SWEFGRQRGP SIG
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