Gene Pnap_3663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3663 
Symbol 
ID4687246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3897027 
End bp3898286 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content70% 
IMG OID639836681 
Productsodium/hydrogen exchanger 
Protein accessionYP_983880 
Protein GI121606551 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA TCATGGCCAT CTGGGCCGAA TGGATCAAGC CATCGGCCGG ACTGCCGACC 
GTGCAATGGT CCATCCTGCT CGCGCTTGCC GCCGCCGCCG GCCACCTGGT CAACCGCTAC
ACCGGCCTGC CCAAGGTGAT TGGCTATTCG GCCGTCGGCA CCTTTGCCGG CCTGGCCGGC
TTCACCGGCG CGGCCTGGCC GCTGCAGGGA ACCGGCCTGT TTTTGCTCGA ACTGGGCGTG
GCGGTGGTGC TGTTCGAAGC CGGCGGGCGC ATTCCGCTGC GCTGGTTCCG GCACAACCCG
ATGGTGCTGG TGCAAAGCCT GGCGGAATCG ACGCTGACTT ATTTCGGGGT GTACTGGCTG
CTCGGCCTGA TGGGCGTGCC GGCCGTGGTG GCCGAGTCGC TGGCGCTGGT CGCCATGGCC
GCGTCGCCGG CGGTGCTGTC GCGGGTGGCG ATTGACACCC GCGCCGCCGG CCCGGTCACC
GAGCGCGCGC TGGTGCTGTC CACCCTGAGC ACGCTGTATG CACTGACGCT GTGCAGCGCC
AGAGCCGGCA TGCTGCCGCG CGGCGAAGCC GGCCTGTCGG ACACGCTGCT TCCGGTGCTG
GTGGTGCTGG GCCTGTCGGT GGTCGTGGCC GCCGTGCTGG CGCTGGTGCT GCGCACGGCG
CTGCGGGTGA TGAGCCCGAC CAGCGAGAAC ACCGCCATCC TGCTGCTGTC GCTGATTGCG
GCCGGGGCGG CGCTGGCATC CAACTTCGGC GGCTCGGCGC CGCTGGCGGC GCTGCTGGGC
GGCATGCTGC TCAAGCAACT CAACCCGCGC CCCTGGTCCT GGCCCCGGCA GATGGGCACG
GCCTCGTCGA TGCTCACCAT GCTGATGTTC GTGCTGGTGT CGGTGGTGGC GGCGCAGGCC
GACTGGAGCC GGCCCGTGGC CAGCCTGGTC CTTGGCCTGG TGGTGGTGCG AATGATCGCC
AAGGTGGCCG GCGTGTCGCT GGGCAATGCC GGCAGCGGCA CCAGCTGGCG CCAGGGCCTG
TGGGTCGGCT GCGCCATGTC GCCGATGTCG TCGGTGGCCT TGCTGCTGGT GTCGCAGTAC
GTGGCCGCTT CGTCGTCCAT CGGCGGCCAG GTGGCCGTCA TCGCCCTGCC CGCCATCCTG
CTGATGGAAA TGCTGGGTGC CGTGCTGGCC ACGGTCGCCC TTTACCGCGC CGGCGAATGC
TCGCGGCCCT GGTCTCCCGT CGTGCGCGGC GCTTCAACCG GACCTGTCCA TGAGTCTTGA
 
Protein sequence
MNEIMAIWAE WIKPSAGLPT VQWSILLALA AAAGHLVNRY TGLPKVIGYS AVGTFAGLAG 
FTGAAWPLQG TGLFLLELGV AVVLFEAGGR IPLRWFRHNP MVLVQSLAES TLTYFGVYWL
LGLMGVPAVV AESLALVAMA ASPAVLSRVA IDTRAAGPVT ERALVLSTLS TLYALTLCSA
RAGMLPRGEA GLSDTLLPVL VVLGLSVVVA AVLALVLRTA LRVMSPTSEN TAILLLSLIA
AGAALASNFG GSAPLAALLG GMLLKQLNPR PWSWPRQMGT ASSMLTMLMF VLVSVVAAQA
DWSRPVASLV LGLVVVRMIA KVAGVSLGNA GSGTSWRQGL WVGCAMSPMS SVALLLVSQY
VAASSSIGGQ VAVIALPAIL LMEMLGAVLA TVALYRAGEC SRPWSPVVRG ASTGPVHES