Gene Pnap_3614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3614 
Symbol 
ID4689585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3845161 
End bp3846150 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content66% 
IMG OID639836627 
Producthypothetical protein 
Protein accessionYP_983831 
Protein GI121606502 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.200616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC TGTTAGTTCT TGCTGCCGCC GCGGCGACCC TCTTCGCCGC CAACGCGCAA 
ACCTTTCCGG GCTCCAAGCC CATCACCTTC GTGGTGCCGT TCGCCGCTGG CGGCCCGACC
GACCGCGTGG CGCGCGACCT GGCCGAAGCC ATGCGCAAGT CCATGGGCGG CGGCGCCAAC
TTCGTGGTTG AAAACGTGAA CGGCGCCGGC GGCACCATCG GCGCCAACAA GGTCGCCAAG
GCCGCGCCCG ACGGCCACAC GCTGCTGCTG CACCACATCG GCATGGCCTC GGCGCCCAGC
CTGTACCGCA AGCTGCAGTA CAAGCCGCTG GAAGACTTCG AATACCTCGG CATGGTCAAC
GAAGTGCCGA TGACGCTGAT CGGCAAGCCG CAGCTCGAAG CCAAGAACTA CCGCGAACTC
GAAACCTACA TTCGCGCCAA TGCCGGCAAG CTCAATATCG CCCATGCCGG GCTGGGTTCG
GCCTCGCACC TGTGCGGCCT GATGTGGCAG TCGGCCATCA ACGCCACGGA GGCGATGACG
ACGATTCCGT TCGGCGGCAC GGCGCCGGCC ATGAATGCGC TGGTCGGCGG CCAGGTGGAC
ATGATGTGCG ACCAGACCAC CAACACCACC GGCCAGATCG AGGCCGGCCG CGTCAAGGCC
TATGCGGTCA CGACGGCCAA GCCCCTGACC GGCAACAAGC TGCTCAAGGA TCTGCCGACG
CTGCAGCAAG CCGGCCTCAA GGGTTTTGAC CTGACGATCT GGCACGGCCT GTACGCGCCC
AAGGGCACGC CGCCCGCCGT GCTCGCGCAG ATCAACGCCG CCCTGAAAAA GGCGCTGAAA
GACCCCGACT TCATCAAGAA GCAGGAAGGC CTGGGCGCCG TGGTGGTGAC CGACAACCGC
GTCGAGCCCG CCGCGCACAA GGCCTTCGTG ACCGCCGAGA TCAACAAGCT CAAGCCGGTG
ATCGAAGCCG GCGGCAAATT CGCCGACTGA
 
Protein sequence
MKRLLVLAAA AATLFAANAQ TFPGSKPITF VVPFAAGGPT DRVARDLAEA MRKSMGGGAN 
FVVENVNGAG GTIGANKVAK AAPDGHTLLL HHIGMASAPS LYRKLQYKPL EDFEYLGMVN
EVPMTLIGKP QLEAKNYREL ETYIRANAGK LNIAHAGLGS ASHLCGLMWQ SAINATEAMT
TIPFGGTAPA MNALVGGQVD MMCDQTTNTT GQIEAGRVKA YAVTTAKPLT GNKLLKDLPT
LQQAGLKGFD LTIWHGLYAP KGTPPAVLAQ INAALKKALK DPDFIKKQEG LGAVVVTDNR
VEPAAHKAFV TAEINKLKPV IEAGGKFAD