| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3523 |
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| Symbol | |
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| ID | 4686056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3740157 |
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| End bp | 3740831 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639836537 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_983741 |
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| Protein GI | 121606412 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGAGA CGATTCGCCT CATCCTGGTG GATGACCACC CCTTCGTGCG CGACGGAGTC
CGCATGCGGC TGGAAGCCAC GGACGACATC CGGGTGGTCG GAGAAGCCGG CAGCGTTGAC
GAGGCCATGC AACTTGCCAC CGATCTGGGT GATGAGCGCG CACCGCATAT CGTGCTGACC
GACATCAGCA TGCGCGGGAT GAGCGGAATT GAACTGGCCG CCCTGTTTCA GCATCGCTTT
CCGGGCATTG ATGTGCTGGT TCTGTCAATG CACAACAACC TTGAATATGT CAAACGCGCC
ATCGAGTCAG GCGCCAAAGG CTATGTGCTC AAGGATGCGC CCGCCCAGGA ACTGGTCAAC
GCGATTCGGG CCGTCCATGC CGGAGAGACC TTTTTCAGCC CCGAACTTCA GCAATACACA
GAAGGGTTCC GGGCGTCCAG CGGCGGGAAC AGTCCGCTGA CGCCGAAAGA ATCGGCAACT
CTGGCCTGGC TGGCATGCGG CTATTCCAAC AAGCAAATTG CCCGGGAGTT GAGCATGTCA
GTGCGCACGG TTGAAACTCA CCGGCTCAAT CTGCGGCGAA AACTGCGCAT CACAGGACAG
GCAGAACTGG TCAAGTACGC AATCGACCAC ATGCTGCCGC TGAAGAAGCT GCAAGCCACC
CGCGACGAGG TGTGA
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| Protein sequence | MQETIRLILV DDHPFVRDGV RMRLEATDDI RVVGEAGSVD EAMQLATDLG DERAPHIVLT
DISMRGMSGI ELAALFQHRF PGIDVLVLSM HNNLEYVKRA IESGAKGYVL KDAPAQELVN
AIRAVHAGET FFSPELQQYT EGFRASSGGN SPLTPKESAT LAWLACGYSN KQIARELSMS
VRTVETHRLN LRRKLRITGQ AELVKYAIDH MLPLKKLQAT RDEV
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