| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3152 |
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| Symbol | |
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| ID | 4687117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3346232 |
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| End bp | 3348265 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836164 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_983371 |
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| Protein GI | 121606042 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCATC TGCTGGCAGC TGGCAGTTGT CAACTGCACC GCATAATAAT GTGGCACTTT
TTGAAAGTCC ACCTTTTGCC CACAGATTCC GGCTTTCTTT CGACCCGTCC AGACTCTCTG
GGTGATGCAG AGCCGCGCCC GACCACGCTG GCCGGGCTGC TGCAGATGAC ACAGACACTT
AAGTCCGAAC CCATCATCAC TCTGGCGGCC GCGATCGAAC AACTGGGTTT GCTCAATCCC
CGGGAAATTG ATGCGCTCAT GCGCGAAGAC CCGCAGTTGC TGCGCAGCAA GTCGTCTGAA
CTGGTGCGGC GCCTGCTGCT GACGCGCGAA GATATTCACC ATGCGCTGTC GCGCACCGCC
GGAATCGTCG AGGTGGATGC CGCCAACTTT GTGCTGCCAG ACCGCACATT TGATATCCAG
CTGCTGAGCA TCATGCGCGC GCATGACCTG CTGTTTTTGG GGGAGGCCAA CGAGACGCTG
TTCGTGGCCA CCTGGTATCC CACCGACGAG AAACTCCACA ACCGCCTGCA CATGATGACC
GGCCGCAGCG TGAGGATGGT CTGGGCGGAC CGCGATGCCA TCGTGGAGCG CCTGGAGCGC
ATGAATCCTC TTGCGCCAAG GCAGGCCCCC GAGGAGGAGC GACAGAAAAC GCATGAGCCC
GTCATGCCCA AAGTGTCCAA TGGTCCGGTC TCTGCTGCTG GCACTGAAGA GCCCGCAGAG
CAGGACATGC AATACCTGAT GGCCGAGGCG GTTCGGACCA TGGCATCGGG CCAGACGCAG
GAGGAACTCG ATGAACTCAG CGATTCACCC AGCATGGTGC GCATGGTCAA GCGCCTGATC
ATGGACGCGC AGGCCCTTCG TGCGTCCGAT ATTCACATCG AAACCAATCC GGGCGAGGAG
TTCACCCGCA TCCGCCTGCG CCGCGACGGC GACCTGGAGC TGTACCAGAA GCTCTCGCCC
AGGCTGCGCG CGGCCATGGT GTCGCGCATC AAGGTGATGG CGCGGCTTGA TATTTCCGAA
CGCCGCCGGC CGCAGGACGG CAAGATCAGT TTCAGCGAGT TCGGCGGCGA CCCCCTGGAA
CTGCGGGTGT CCATCATGCC GACGCACGAC GGCATGGAGG ACGTGGTGAT GCGGCTGCTG
GCTTCCTCGA AGCCGGTGCC GCTGGCCAAA CTGGGCCTGC AGCCGCGCGA TGCCGAGGCG
GTGGCGCGCA TGTCGGCGCG CTCGTTCGGC CTGATCCTGG CGGCCGGCCC GACCGGATCG
GGCAAGACCA CCACGCTGCA CTCGATGCTG GCCGAGATCA ACACCGAGGA GCGCAAAATC
TGGACCGCCG AGGATCCGAT AGAAATCACC CAGCCCGGCC TGCGCCAGGT GCAGGTCAAC
CCGAAGATCG GGCTGACCTT TGCCAACGCC ATGCGGGGCT TCCTGCGGGC CGACCCGGAC
GTCATCATGA TCGGCGAAAT CCGCGACACC GAAACCGCCA GGATCGTCAT TGAAGCCTCG
CTGACCGGCC ACCTGGTGCT GTCAACCCTG CACACCAACA GCGCCTCCGA GAGTGTCGTG
CGCCTGCTGG ACCTGGGCAT GGATGCGATG AACTTCGCCG ATTCGCTGGT CGGCATCGTG
GCGCAGCGGC TGATCCGGTC GCTGTGCGCG CACTGTTCGA AAAAGGGGCC GCTGCTGCCC
GGGCAATTTT CTGAACTGGT CAAGGAATAC GTGCAGGCCT CGCCCCTGAG CGAGGAAGAG
GGCGCCCGGC GCCTGCTGGC CGCCGCCGGG GTTCAGACGC CCGAGGAGGT CACGCTCAAA
ACGGCGCAGG GCTGCGACCA CTGCGGCGGC AAGGGCTACA AGGGGCGAAT GGGCATCTAT
GAAATCCTGG AAAACAGCCC GACGCTGCGG CTGCTCATCC AGCGCAATGC CCGGCCCACC
GAGATTTATG AAGAGGCGAT TCGCTCGGGC ATGCGCAGCC TGCGCCATGA CGCGCTGGAA
AAATGCTTTC AAGGCCTGAT CGACCTGCAT CAGGCGAGCC TGGCTTATCT GTGA
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| Protein sequence | MRHLLAAGSC QLHRIIMWHF LKVHLLPTDS GFLSTRPDSL GDAEPRPTTL AGLLQMTQTL
KSEPIITLAA AIEQLGLLNP REIDALMRED PQLLRSKSSE LVRRLLLTRE DIHHALSRTA
GIVEVDAANF VLPDRTFDIQ LLSIMRAHDL LFLGEANETL FVATWYPTDE KLHNRLHMMT
GRSVRMVWAD RDAIVERLER MNPLAPRQAP EEERQKTHEP VMPKVSNGPV SAAGTEEPAE
QDMQYLMAEA VRTMASGQTQ EELDELSDSP SMVRMVKRLI MDAQALRASD IHIETNPGEE
FTRIRLRRDG DLELYQKLSP RLRAAMVSRI KVMARLDISE RRRPQDGKIS FSEFGGDPLE
LRVSIMPTHD GMEDVVMRLL ASSKPVPLAK LGLQPRDAEA VARMSARSFG LILAAGPTGS
GKTTTLHSML AEINTEERKI WTAEDPIEIT QPGLRQVQVN PKIGLTFANA MRGFLRADPD
VIMIGEIRDT ETARIVIEAS LTGHLVLSTL HTNSASESVV RLLDLGMDAM NFADSLVGIV
AQRLIRSLCA HCSKKGPLLP GQFSELVKEY VQASPLSEEE GARRLLAAAG VQTPEEVTLK
TAQGCDHCGG KGYKGRMGIY EILENSPTLR LLIQRNARPT EIYEEAIRSG MRSLRHDALE
KCFQGLIDLH QASLAYL
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