Gene Pnap_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3122 
Symbol 
ID4687156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3313711 
End bp3314853 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content50% 
IMG OID639836134 
ProductLPS biosynthesis protein WbpG 
Protein accessionYP_983341 
Protein GI121606012 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR03573] N-acetyl sugar amidotransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC AATATCAGCT TTGCACCCGT TGCGTGATGG ACAGCAGCGA CCCGGCGATC 
AGCTTCAATG CTCAGGGCAT ATGCAACCAT TGCCGTGAGT TTGACGAAGT AAGCGCCAAG
GGGTGGTTCC CCAATGAAGA AGGCGCCAGG CGCCTTGCTG TGATGGTGGA GCAAATCAAG
GCAGAGGGCA AAGGCAAACC TTACGATTGC ATTCTTGGCC TGAGCGGTGG CGTGGACAGT
TCTTATCTCG CACTGAAAGT GCATGAGCGG GGCCTGCGGC CCCTGGTCGT GCATGTTGAT
GCCGGCTGGA ACAGCGAGCT GGCCGTTGCC AACATTGAAA AAATAGTGAA GTTCTGCGAT
TTTGACCTGC ACACCCATGT CGTGGATTGG GAGGAAATGC GCGACTTGCA ACTGGCATTT
CTTCGCTCGG GCATTGCAAA CCAGGATGTG CCACAGGACC ACATTTTTTT CGCGAGTATT
TATCACTATG CGACTAAACA TGGCATCAAG TACGTGCTCA GCGGCGGCAA TCTGGCCACC
GAGGGTATTT ATCCAAAGGC ATGGACCGGG AGTGCCATGG ACGCTATCAA TCTTCATGCC
ATCCATCGCA AGTTTGGCCA GCGCAGGCTA AAGGATTACA GGACGGTGAG TTTTTTCGAT
TACTACCTCT GGTATCCCTT TGTGAAACAG CTGCGCACGG TTCGTCCGCT GAACTACATG
CCCTATGATA AAAAAATGGC TGTAGTGGAA CTGGAGCAGA AAATCGGCTG GCGAGCGTAT
GGACGAAAGC ACGGTGAATC CATTTTCACG AAGTTTTTCC AGAATTATTA TTTGCCCGCC
AGGTTCGGGT ATGACAAACG GCGACCTCAT TTTTCGAGTT TGATAGTTTC GGGGCAAATG
TCTCGCGACG AGGCTATGGA GAAACTGGCC GAACCCTTGT ATTCTCCGAA AGAGCTTGAA
ATAGATATTG CTTATCTGTG CAAGAAACTG GGAATTGGCC GCAATGAGTT CGAGGAATTT
ATTATGGCGC CCAAGCACAG TTTTCTGGAA TATCCGAATT GGATCAGTCT CCAGAATTTC
ATCAAGAAAA TGCAGGGGCT GGGCTTTCGT ATAACAGGAA GAAAAATCAG CATTTATTCC
TGA
 
Protein sequence
MNTQYQLCTR CVMDSSDPAI SFNAQGICNH CREFDEVSAK GWFPNEEGAR RLAVMVEQIK 
AEGKGKPYDC ILGLSGGVDS SYLALKVHER GLRPLVVHVD AGWNSELAVA NIEKIVKFCD
FDLHTHVVDW EEMRDLQLAF LRSGIANQDV PQDHIFFASI YHYATKHGIK YVLSGGNLAT
EGIYPKAWTG SAMDAINLHA IHRKFGQRRL KDYRTVSFFD YYLWYPFVKQ LRTVRPLNYM
PYDKKMAVVE LEQKIGWRAY GRKHGESIFT KFFQNYYLPA RFGYDKRRPH FSSLIVSGQM
SRDEAMEKLA EPLYSPKELE IDIAYLCKKL GIGRNEFEEF IMAPKHSFLE YPNWISLQNF
IKKMQGLGFR ITGRKISIYS