Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3119 |
Symbol | |
ID | 4687138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3309376 |
End bp | 3310614 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639836131 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_983338 |
Protein GI | 121606009 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATCT TGCTGATTAA CCACTATGCG GGCTCGACCC GGCATGGCAT GGAGTTCCGG CCGTTTTATT TGGCGCGCGA ATGGGTGCGT GCCGGGCACC GCGTGCAGAT TGTCGCGGCA TCGTTCTCGC ACATTCGTGC CAGGCAGCCG GAGCTGGATG GCGCGGTGCT GGAGGAACAG ATCGAGGGCA TCGACTACCG CTGGCTTGTG ACCCCAGGCT ACAAGGGCAA TGGTGCGGGC CGAGTCAAAA ACATGCTGGC ATTCATGTGG GCGCTGTGGC GTGACAGCCC ACGCCTGGCA CGCGAGTTCA AACCCGATGT GGTGATTGCC TCCAGCACCT ATCCGATGGA TATCTGGCCG GCCCGCAGGA TTGCCCGGCT GAGCAAGGCC CGGCTGGTGT ATGAGGTGCA TGACCTGTGG CCGCTCTCGC CCATGGAGCT GGGCGGTCTT TCACGCTGGC ACCCGTTCAT CATCTGGGTG CAGATGGCTG AAGACTATGC CTACCGCCAT GCGGACAAGG TGGTTTCCAT GCTTCCCAAG GCCGGGCAGT ACATGTGTTC GCGCGGCATG GCGCCGCAAA AATTTACCTA TGTGCCCAAT GGCGTGGATG AGCAAGAGTG GGCGCAGCCG GCAGATCTGC CGCAGCCGGT GAAAGCGGCC CTGGATACCT TGCGCGCCAA AGGGCTTCCG TTGGTGGGCT ATGCCGGAAC GCATGGGTTA AGCAATGCCC TGGACGTGCT TCTGGATGCG GCGAGCCAGT TGAAAGGCAA GGCCGAAGTG GTCATCGTCG GCACCGGCCC GGATCGGGAC GCCCTGCTGG CACGGGTGGC GAATGAGGAT TTGTCCAACG TCACGATGCT GCCCGCTATT CCAAAGCAAT CCGTACCCCG ATTCCTGGAC GGCGTCGATA TTGCCTATAT CGGCTGGCAT CCCAATCCGC TTTACCGTTT CGGCATCTCA CCCAACAAGC TCATGGATTA CATGATGGCT GGCAAGCCGG TGGTGCATTC CGTCAGCGCA GGCAATGACC CGGTGGCGGA AGCCGGGTGC GGTTTTACCG TGCCGCCGGG CGATGCGGCA GCCGTGGCGC AGGCCATATT GAAACTGGCG GCCATGTCGG ACGCGCAACG AAAGCTGCTG GGTGCGGCAG GAAAGAGGTT TATTTTAAAA AACCAGACCT ATCCGCGTCT AGCTGCGAAT TTCCTGGCGG CAACCGCCAG ATCTGCTTCT GTTTCATAA
|
Protein sequence | MNILLINHYA GSTRHGMEFR PFYLAREWVR AGHRVQIVAA SFSHIRARQP ELDGAVLEEQ IEGIDYRWLV TPGYKGNGAG RVKNMLAFMW ALWRDSPRLA REFKPDVVIA SSTYPMDIWP ARRIARLSKA RLVYEVHDLW PLSPMELGGL SRWHPFIIWV QMAEDYAYRH ADKVVSMLPK AGQYMCSRGM APQKFTYVPN GVDEQEWAQP ADLPQPVKAA LDTLRAKGLP LVGYAGTHGL SNALDVLLDA ASQLKGKAEV VIVGTGPDRD ALLARVANED LSNVTMLPAI PKQSVPRFLD GVDIAYIGWH PNPLYRFGIS PNKLMDYMMA GKPVVHSVSA GNDPVAEAGC GFTVPPGDAA AVAQAILKLA AMSDAQRKLL GAAGKRFILK NQTYPRLAAN FLAATARSAS VS
|
| |