Gene Pnap_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3119 
Symbol 
ID4687138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3309376 
End bp3310614 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content60% 
IMG OID639836131 
Productglycosyl transferase, group 1 
Protein accessionYP_983338 
Protein GI121606009 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCT TGCTGATTAA CCACTATGCG GGCTCGACCC GGCATGGCAT GGAGTTCCGG 
CCGTTTTATT TGGCGCGCGA ATGGGTGCGT GCCGGGCACC GCGTGCAGAT TGTCGCGGCA
TCGTTCTCGC ACATTCGTGC CAGGCAGCCG GAGCTGGATG GCGCGGTGCT GGAGGAACAG
ATCGAGGGCA TCGACTACCG CTGGCTTGTG ACCCCAGGCT ACAAGGGCAA TGGTGCGGGC
CGAGTCAAAA ACATGCTGGC ATTCATGTGG GCGCTGTGGC GTGACAGCCC ACGCCTGGCA
CGCGAGTTCA AACCCGATGT GGTGATTGCC TCCAGCACCT ATCCGATGGA TATCTGGCCG
GCCCGCAGGA TTGCCCGGCT GAGCAAGGCC CGGCTGGTGT ATGAGGTGCA TGACCTGTGG
CCGCTCTCGC CCATGGAGCT GGGCGGTCTT TCACGCTGGC ACCCGTTCAT CATCTGGGTG
CAGATGGCTG AAGACTATGC CTACCGCCAT GCGGACAAGG TGGTTTCCAT GCTTCCCAAG
GCCGGGCAGT ACATGTGTTC GCGCGGCATG GCGCCGCAAA AATTTACCTA TGTGCCCAAT
GGCGTGGATG AGCAAGAGTG GGCGCAGCCG GCAGATCTGC CGCAGCCGGT GAAAGCGGCC
CTGGATACCT TGCGCGCCAA AGGGCTTCCG TTGGTGGGCT ATGCCGGAAC GCATGGGTTA
AGCAATGCCC TGGACGTGCT TCTGGATGCG GCGAGCCAGT TGAAAGGCAA GGCCGAAGTG
GTCATCGTCG GCACCGGCCC GGATCGGGAC GCCCTGCTGG CACGGGTGGC GAATGAGGAT
TTGTCCAACG TCACGATGCT GCCCGCTATT CCAAAGCAAT CCGTACCCCG ATTCCTGGAC
GGCGTCGATA TTGCCTATAT CGGCTGGCAT CCCAATCCGC TTTACCGTTT CGGCATCTCA
CCCAACAAGC TCATGGATTA CATGATGGCT GGCAAGCCGG TGGTGCATTC CGTCAGCGCA
GGCAATGACC CGGTGGCGGA AGCCGGGTGC GGTTTTACCG TGCCGCCGGG CGATGCGGCA
GCCGTGGCGC AGGCCATATT GAAACTGGCG GCCATGTCGG ACGCGCAACG AAAGCTGCTG
GGTGCGGCAG GAAAGAGGTT TATTTTAAAA AACCAGACCT ATCCGCGTCT AGCTGCGAAT
TTCCTGGCGG CAACCGCCAG ATCTGCTTCT GTTTCATAA
 
Protein sequence
MNILLINHYA GSTRHGMEFR PFYLAREWVR AGHRVQIVAA SFSHIRARQP ELDGAVLEEQ 
IEGIDYRWLV TPGYKGNGAG RVKNMLAFMW ALWRDSPRLA REFKPDVVIA SSTYPMDIWP
ARRIARLSKA RLVYEVHDLW PLSPMELGGL SRWHPFIIWV QMAEDYAYRH ADKVVSMLPK
AGQYMCSRGM APQKFTYVPN GVDEQEWAQP ADLPQPVKAA LDTLRAKGLP LVGYAGTHGL
SNALDVLLDA ASQLKGKAEV VIVGTGPDRD ALLARVANED LSNVTMLPAI PKQSVPRFLD
GVDIAYIGWH PNPLYRFGIS PNKLMDYMMA GKPVVHSVSA GNDPVAEAGC GFTVPPGDAA
AVAQAILKLA AMSDAQRKLL GAAGKRFILK NQTYPRLAAN FLAATARSAS VS