Gene Pnap_2902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2902 
Symbol 
ID4688024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3051342 
End bp3053207 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content63% 
IMG OID639835909 
ProductN6 adenine-specific DNA methyltransferase protein, N12 class 
Protein accessionYP_983122 
Protein GI121605793 
COG category[V] Defense mechanisms 
COG ID[COG1002] Type II restriction enzyme, methylase subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00367965 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGCCCC AGGACTTTAT TCAAAAATGG GGTCCCGGCG GCCCCGCCCA TGGCCTGAAT 
GAAGAGCAGG GCGCGCAAAG CCATTTCCTG GATTTGTGCG AACTGCTTGG CGTGCCCAAG
CCCGGCAGTG AAGCGGGCTA CCTGTTTGAA GAAAAAAACA GCGTCATCGG CGGGCGCACG
GGTTACGCCG ATGTGTTCCG GCGCGGTGCA TTCGCCTGGG AAAACAAGGC GCCCGGCAAG
AACCTCGACG CCGCGCTCAA GCAGTTGCTG AGCTACAGCC TGGCGCTGAG CAATCCGCCC
ATCCTGGTGG TCTGCGACCG CCTGACGATA CGCATCCACA CCCAGTTCAC CGGCCACCCG
AGCGAGACGC ACACGGTGCT GCTGGCCGAA CTCGACCAGC CGGCCAAGCT GGCGCTGCTG
CGCCGCATCT GGACGGCGCC CGAGAGCTTT CGCCCCAAGA AAACCAGCCG CGACATCACC
GAAGCGGCCG CGCGCAGCTT TGCCACGCTG GCCGAAGGCC TGCGCAAGCG CGGCCCGGCC
AAAGAAACCG ACCCGCAAGG CTGGCAAACG CATGCCGACG AGGTGGCGCA TTTCCTCACG
CAATGCCTGT TCTGCTTTTT TGCCGAAGAC GTGGGCCTGC TGCCCGGGCG CATGTTCGAG
GGGTTGGTGA ACAACCGCAA GCTCACCAGC GACAAGCTGA CCGGCGGGCT GCGCAACCTG
TTCAGCGTGA TGCGTGACGG CGGGCTGTAC GGCAACGACG ACATTCCGTG GTTCAACGGC
GGGCTGTTCA AGACCATCAA GGTGCCGCCG CTCACCGTGC TCGACATGAC CGAGCTGCGC
AATGCCGCCG GCCTGAACTG GAGCGCGATT GACGTGTCGA TCTTCGGCAC GCTGTTCGAG
CGCGGGCTGG ACCCCGGCAA GCGCAGCCAG CTCGGCGCGC ACTACACCGA CCCGGCGACC
ATCGAGCGCA TCGTCGAGCC CGTTCTCAAG CGCCCGCTGC TACAGGTTTG GAAGCAGCTC
GTGTCCGTGC TGCAAGCGCT ACTGGCCAAA AGCACCAAAA AAGGCGATAA AAACTACAAG
GCCGCGCAGG TCAAGTTCAT CGGCGGGCTC GACCAGCTCA AGGACTTCCG CGTGCTCGAC
CCGGCCTGCG GCAGCGGCAA TTTCCTGTTC ATGGGCCTGA AGGCGCTCAA GGACATCGAG
CACCAGAGCC ACATCGAAGC CGCCGCGCTG GGGCTGGACC GCGAAGCCGA CCTGGTGACC
GGCCCGCACA ACATGCTGGG GCTGGAGCTG AACGAATACG CCGCCGAACT GGCGCGCGTC
ACGGTCTGGA TTGGCGAGCT GCAATGGCGG CTGCTGCACG GCTACGAGTT CAAGACCAAC
CCGGTGCTGG AGCCGCTCGA CCATATCGAG TGCCGCGACG CGCTGCTGAC GTTTGGCGCT
TGCGGCGCTG CGCCGGTCGA GGCCGATTGG CCGAAAGCCA GCGTGGTGAT GGGAAATCCG
CCGTTTCTGG GCGACAAGAT GATGCGCTCA GAGCTAGGCG ATGCCTACAC TGACACGCTA
CGGCAGGTTT ACAAGGATAG AGTGCCGGGC GGGGCTGATA TGGTGATGTT TTGGTTTGAA
AAAGCCAGAT CCCAGATTGA AAAAACCGGG CTTTATGCCG CCGGACTCGT GGCCACCAAT
TCCATTCGCC AGCGCGGTAA CCGTCCCGTG ATTGAACGTA TCCAGAAGAC GACACGGATA
TATGAAGCGT GGGCTGACAT GCCGTGGGTA AATCAAGGTG CTGCCGTGCG TGTTTCGTTA
GTGTGTTTTG GCCAAGCAAC GCAGGGTGCG AGACTAGTGT CTCGTCATGA GGAAGTTGTC
GGGTAA
 
Protein sequence
MTPQDFIQKW GPGGPAHGLN EEQGAQSHFL DLCELLGVPK PGSEAGYLFE EKNSVIGGRT 
GYADVFRRGA FAWENKAPGK NLDAALKQLL SYSLALSNPP ILVVCDRLTI RIHTQFTGHP
SETHTVLLAE LDQPAKLALL RRIWTAPESF RPKKTSRDIT EAAARSFATL AEGLRKRGPA
KETDPQGWQT HADEVAHFLT QCLFCFFAED VGLLPGRMFE GLVNNRKLTS DKLTGGLRNL
FSVMRDGGLY GNDDIPWFNG GLFKTIKVPP LTVLDMTELR NAAGLNWSAI DVSIFGTLFE
RGLDPGKRSQ LGAHYTDPAT IERIVEPVLK RPLLQVWKQL VSVLQALLAK STKKGDKNYK
AAQVKFIGGL DQLKDFRVLD PACGSGNFLF MGLKALKDIE HQSHIEAAAL GLDREADLVT
GPHNMLGLEL NEYAAELARV TVWIGELQWR LLHGYEFKTN PVLEPLDHIE CRDALLTFGA
CGAAPVEADW PKASVVMGNP PFLGDKMMRS ELGDAYTDTL RQVYKDRVPG GADMVMFWFE
KARSQIEKTG LYAAGLVATN SIRQRGNRPV IERIQKTTRI YEAWADMPWV NQGAAVRVSL
VCFGQATQGA RLVSRHEEVV G