Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2902 |
Symbol | |
ID | 4688024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3051342 |
End bp | 3053207 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639835909 |
Product | N6 adenine-specific DNA methyltransferase protein, N12 class |
Protein accession | YP_983122 |
Protein GI | 121605793 |
COG category | [V] Defense mechanisms |
COG ID | [COG1002] Type II restriction enzyme, methylase subunits |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00367965 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACGCCCC AGGACTTTAT TCAAAAATGG GGTCCCGGCG GCCCCGCCCA TGGCCTGAAT GAAGAGCAGG GCGCGCAAAG CCATTTCCTG GATTTGTGCG AACTGCTTGG CGTGCCCAAG CCCGGCAGTG AAGCGGGCTA CCTGTTTGAA GAAAAAAACA GCGTCATCGG CGGGCGCACG GGTTACGCCG ATGTGTTCCG GCGCGGTGCA TTCGCCTGGG AAAACAAGGC GCCCGGCAAG AACCTCGACG CCGCGCTCAA GCAGTTGCTG AGCTACAGCC TGGCGCTGAG CAATCCGCCC ATCCTGGTGG TCTGCGACCG CCTGACGATA CGCATCCACA CCCAGTTCAC CGGCCACCCG AGCGAGACGC ACACGGTGCT GCTGGCCGAA CTCGACCAGC CGGCCAAGCT GGCGCTGCTG CGCCGCATCT GGACGGCGCC CGAGAGCTTT CGCCCCAAGA AAACCAGCCG CGACATCACC GAAGCGGCCG CGCGCAGCTT TGCCACGCTG GCCGAAGGCC TGCGCAAGCG CGGCCCGGCC AAAGAAACCG ACCCGCAAGG CTGGCAAACG CATGCCGACG AGGTGGCGCA TTTCCTCACG CAATGCCTGT TCTGCTTTTT TGCCGAAGAC GTGGGCCTGC TGCCCGGGCG CATGTTCGAG GGGTTGGTGA ACAACCGCAA GCTCACCAGC GACAAGCTGA CCGGCGGGCT GCGCAACCTG TTCAGCGTGA TGCGTGACGG CGGGCTGTAC GGCAACGACG ACATTCCGTG GTTCAACGGC GGGCTGTTCA AGACCATCAA GGTGCCGCCG CTCACCGTGC TCGACATGAC CGAGCTGCGC AATGCCGCCG GCCTGAACTG GAGCGCGATT GACGTGTCGA TCTTCGGCAC GCTGTTCGAG CGCGGGCTGG ACCCCGGCAA GCGCAGCCAG CTCGGCGCGC ACTACACCGA CCCGGCGACC ATCGAGCGCA TCGTCGAGCC CGTTCTCAAG CGCCCGCTGC TACAGGTTTG GAAGCAGCTC GTGTCCGTGC TGCAAGCGCT ACTGGCCAAA AGCACCAAAA AAGGCGATAA AAACTACAAG GCCGCGCAGG TCAAGTTCAT CGGCGGGCTC GACCAGCTCA AGGACTTCCG CGTGCTCGAC CCGGCCTGCG GCAGCGGCAA TTTCCTGTTC ATGGGCCTGA AGGCGCTCAA GGACATCGAG CACCAGAGCC ACATCGAAGC CGCCGCGCTG GGGCTGGACC GCGAAGCCGA CCTGGTGACC GGCCCGCACA ACATGCTGGG GCTGGAGCTG AACGAATACG CCGCCGAACT GGCGCGCGTC ACGGTCTGGA TTGGCGAGCT GCAATGGCGG CTGCTGCACG GCTACGAGTT CAAGACCAAC CCGGTGCTGG AGCCGCTCGA CCATATCGAG TGCCGCGACG CGCTGCTGAC GTTTGGCGCT TGCGGCGCTG CGCCGGTCGA GGCCGATTGG CCGAAAGCCA GCGTGGTGAT GGGAAATCCG CCGTTTCTGG GCGACAAGAT GATGCGCTCA GAGCTAGGCG ATGCCTACAC TGACACGCTA CGGCAGGTTT ACAAGGATAG AGTGCCGGGC GGGGCTGATA TGGTGATGTT TTGGTTTGAA AAAGCCAGAT CCCAGATTGA AAAAACCGGG CTTTATGCCG CCGGACTCGT GGCCACCAAT TCCATTCGCC AGCGCGGTAA CCGTCCCGTG ATTGAACGTA TCCAGAAGAC GACACGGATA TATGAAGCGT GGGCTGACAT GCCGTGGGTA AATCAAGGTG CTGCCGTGCG TGTTTCGTTA GTGTGTTTTG GCCAAGCAAC GCAGGGTGCG AGACTAGTGT CTCGTCATGA GGAAGTTGTC GGGTAA
|
Protein sequence | MTPQDFIQKW GPGGPAHGLN EEQGAQSHFL DLCELLGVPK PGSEAGYLFE EKNSVIGGRT GYADVFRRGA FAWENKAPGK NLDAALKQLL SYSLALSNPP ILVVCDRLTI RIHTQFTGHP SETHTVLLAE LDQPAKLALL RRIWTAPESF RPKKTSRDIT EAAARSFATL AEGLRKRGPA KETDPQGWQT HADEVAHFLT QCLFCFFAED VGLLPGRMFE GLVNNRKLTS DKLTGGLRNL FSVMRDGGLY GNDDIPWFNG GLFKTIKVPP LTVLDMTELR NAAGLNWSAI DVSIFGTLFE RGLDPGKRSQ LGAHYTDPAT IERIVEPVLK RPLLQVWKQL VSVLQALLAK STKKGDKNYK AAQVKFIGGL DQLKDFRVLD PACGSGNFLF MGLKALKDIE HQSHIEAAAL GLDREADLVT GPHNMLGLEL NEYAAELARV TVWIGELQWR LLHGYEFKTN PVLEPLDHIE CRDALLTFGA CGAAPVEADW PKASVVMGNP PFLGDKMMRS ELGDAYTDTL RQVYKDRVPG GADMVMFWFE KARSQIEKTG LYAAGLVATN SIRQRGNRPV IERIQKTTRI YEAWADMPWV NQGAAVRVSL VCFGQATQGA RLVSRHEEVV G
|
| |