Gene Pnap_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2838 
Symbol 
ID4686956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2981868 
End bp2982428 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content61% 
IMG OID639835846 
Producthypothetical protein 
Protein accessionYP_983061 
Protein GI121605732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00209272 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGATAGCTG CTTACGCAAT GTGTACAAGC ACTGGAGCCT CTTTTGATCC GCAGATTCAA 
GTACAAAGTA CGCCATGGGG TAGTCTGGCT GTGCTGGATT GGACCGCAGA CATGCTGATG
CGCCGGCTTC AGTCGGCCGC TGACGCTGAA TTGGCCAAAT TGAACAAGCT CGCCCCGCTG
GCTGCGCTGC AAGCGGTATT CATGGCGCAT GTGGATTTTG TGGCCGCCCA TCCTGGCGTT
CCGCGGGTGA TTTTTCAGGA ACTGCAGCAC GCCCAGGACA CGGCGCTCAA GGCCCGCGTT
CGCGGCCTGA TGCAGCAGTA CCGCAAATTG CTCATGGGCC TGCTGGAGCA TGCGCAAGCG
CAGCGCCTGC TGGCGCCGGG CACTGACCGA GAGGCCGCTG CGGTGCTGTT TGTCGGTTCG
GTGCAGGGCC TGGTCATGCA GTCGCTGATC AGCGGGGAAG TGCGCGCCAT GGCCCAACAG
GCGCCCGCTG TGTTCACTAT TTATTTGCGC GGGCTGGCTG CAACGGGAAG CCGGCACCTC
AGGGCAAAGG ACACCCCATG A
 
Protein sequence
MIAAYAMCTS TGASFDPQIQ VQSTPWGSLA VLDWTADMLM RRLQSAADAE LAKLNKLAPL 
AALQAVFMAH VDFVAAHPGV PRVIFQELQH AQDTALKARV RGLMQQYRKL LMGLLEHAQA
QRLLAPGTDR EAAAVLFVGS VQGLVMQSLI SGEVRAMAQQ APAVFTIYLR GLAATGSRHL
RAKDTP