Gene Pnap_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2515 
Symbol 
ID4687222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand+ 
Start bp2650603 
End bp2651211 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content56% 
IMG OID639835523 
ProductTetR family transcriptional regulator 
Protein accessionYP_982740 
Protein GI121605411 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.326335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC AAGCTTTCAC GAATACGCGA GAAGAGATAC TCGGTCTGTC AGTTTCGCTC 
TTCGCAGCGC GCGGATTTGA CGGGGTGTCG ATGCGCGATA TCGCACAAGG AGTGGGCGTG 
GCGCCGGCTG GCCTCTATCA CTACTTTTCG GACAAGGAGC AACTCTGTCT GGACGCCGTC 
GGATATGCAT TCAAAGAAAA GGTCGAGCCC TTAACGTTCT TTTTGAACGG CGCAGGGGAT 
CCCTGGGGTC GACTTGAAGC GTTCATAACC CAGCTTACGC GCATGCTTGC CAAGGAGAAG 
GACTTTAGGC GCCTGATTCA GTGGGTATTG CTGGACAGCA ATGAGCAGCG CTTGCAAAGC 
CTGGCCGATC GAGTCTTTCG AGACCTATTC AACGCACTGC GCAATCTCGC CGGCGAGGTC 
GCTCCGGGCC ATGACCCCCA GCCGCTCGTT ATTTCAATGA TCGGTCTGGT GATCTATCCC 
TTTGAAACCC AGGCGGTGCG ACGTTTCCTG CCGGGCTACC AACTACAACA TGAAGACCCC 
AAGGCCATTG CGCGGCATGT CGTCGCCTTG CTGCGCAACG GTCTTGGTGA AGCCAACGAG 
GAAAAATGA
 
Protein sequence
MAKQAFTNTR EEILGLSVSL FAARGFDGVS MRDIAQGVGV APAGLYHYFS DKEQLCLDAV 
GYAFKEKVEP LTFFLNGAGD PWGRLEAFIT QLTRMLAKEK DFRRLIQWVL LDSNEQRLQS 
LADRVFRDLF NALRNLAGEV APGHDPQPLV ISMIGLVIYP FETQAVRRFL PGYQLQHEDP 
KAIARHVVAL LRNGLGEANE EK