Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2480 |
Symbol | |
ID | 4689265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2618182 |
End bp | 2618817 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639835488 |
Product | OmpW family protein |
Protein accession | YP_982705 |
Protein GI | 121605376 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.586592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAA AAGCCATTTC CCTCGCCGCG GTTGGGATGC TGATGCTCAG CCATGCATAT GCCGAGGATT CCCGCTGGTC CTACCGCATC GGTGCCACCA ACGTGGCCTT CGATGCGAGC GCCGAAGTCT CTATGAATGG AGGGAGAGTG CCGGGAGGCA GTGCCGACGC CAGCGACAAC AACGCTTTGA CGTTTGATTT CGGCTATGTC ATCAACGACA GCTGGAACGC GCGGTTGATC GTTGGCATTC CTCCCACCAC AAAAGTGACG GGCGCAGGAA CGCTGCCCCC CATTTTGTTG GGCCGCATTC AATACGCCCC TGCGGTTTTG TCGGTGACCT ACAACCTGCC TCAGATGGGG GGGATTCGCC CTTACGTGGG GGCGGGGATC AACTACACCC GAATTTTAAA AAGCGAAGAC GCCAATCTGA CCTCATTCGA TGCAGATCAT GCTTGGGCAC CTGTGCTCCA CATCGGCGCG GAAGCCGACA TCAACCGCGA CTGGTTTGTC AGCTTTGATC TCCGCAAACT TTATTTGAAA ACAGATGCAT CTGGGTTTCT TGGCCCGCAA GTCGCCACGG CCCGCGTAAC ATTGAATCCG TTGTTGACCT CGATTGCGAT TGGTCGGAGA TTTTGA
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Protein sequence | MIKKAISLAA VGMLMLSHAY AEDSRWSYRI GATNVAFDAS AEVSMNGGRV PGGSADASDN NALTFDFGYV INDSWNARLI VGIPPTTKVT GAGTLPPILL GRIQYAPAVL SVTYNLPQMG GIRPYVGAGI NYTRILKSED ANLTSFDADH AWAPVLHIGA EADINRDWFV SFDLRKLYLK TDASGFLGPQ VATARVTLNP LLTSIAIGRR F
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