Gene Pnap_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2164 
Symbol 
ID4686926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2301958 
End bp2302923 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID639835174 
Productauxin efflux carrier 
Protein accessionYP_982393 
Protein GI121605064 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.232164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.102668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATA TCCTGGCCAT CACCGGCCCC ATCTATTTCA CCATCGTCCT GGGTTTTATC 
ACCACGCGGC GGGGTTTGTT CAGTCCGGCC GACATGCGCG TGATGGGCAA GTTCGTGATC
AACCTGGCGC TGCCTGCGCT GCTGTTCAAC GCGCTGGCGC AGCGCCCGAT TGGCGAGATT
CTCAATGGCC GCTACCTGTT CCTCTATGCG GCCGGCTCGC TGCTGACGCT GGGCCTGGGC
TGGCTGTGGG CGCGCCGCGT GGCCGGGCAA GACGGCACCA CCAGCGCCTA CTACGCCATG
GGCATGTCCT GCTCCAACAG CGGTTTCGTC GGCTATCCGA TTGCCTTGCT GACCCTCGGC
CCGGTGGCCG GCGTGGTGCT GGGCCTGAAC ATGATGGTCG AAAATCTTAT TTTGATCCCG
CTGCTGCTGG GGCTGGCTGA AAGTGGCCAG GGGCGCAGCG GCGCCTGGCA TCTGGTGCTG
CGCCAGTCGC TGGTGAATTT GCTGCGCAAC CCGATGGTGC TCGGGCTGCT GGCCGGGCTC
ATGGTGTCGG TGATGGGCTG GCAACTGCCG TCTCCGGTCG CGCGCACGGT CACGCTGTTT
TCCCAGGCCA GCGGCGCGCT GTCGCTGTTC GTGATCGGCG GGGCGCTGGT GGGGCTGAAA
ATCCAGGGCA TGCGGCGCCA GGTGGTGCAG ATTGCCGTGG GCAAGCTGCT GCTGCACCCG
CTGGTCATGC TGGCCGTGCT GCTGCTTTCA GAGGTCGGCG GCTTGACGCC CATGGAGCCG
CAGATGCGCA TGGGCCTGCT GCTGACGGCG GCTTGCCCCA TGCTGGGCAT CTACACGATC
CTGGCGCAAA AGTATGGCCG CGATGGCCTG GCGGCTGCGG CCCTGCTGGG CGCCACCGTG
GCGTCATTCG GGTCGATCAG CCTCTTGCTG TGGGTGTTTC GGTCACTGCC GGGCTGGGGC
GCCTGA
 
Protein sequence
MLDILAITGP IYFTIVLGFI TTRRGLFSPA DMRVMGKFVI NLALPALLFN ALAQRPIGEI 
LNGRYLFLYA AGSLLTLGLG WLWARRVAGQ DGTTSAYYAM GMSCSNSGFV GYPIALLTLG
PVAGVVLGLN MMVENLILIP LLLGLAESGQ GRSGAWHLVL RQSLVNLLRN PMVLGLLAGL
MVSVMGWQLP SPVARTVTLF SQASGALSLF VIGGALVGLK IQGMRRQVVQ IAVGKLLLHP
LVMLAVLLLS EVGGLTPMEP QMRMGLLLTA ACPMLGIYTI LAQKYGRDGL AAAALLGATV
ASFGSISLLL WVFRSLPGWG A