Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2133 |
Symbol | |
ID | 4687893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2271368 |
End bp | 2273371 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639835144 |
Product | acetoacetyl-CoA synthase |
Protein accession | YP_982363 |
Protein GI | 121605034 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.569736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00936242 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAAGAAA ACACCCCGCC CGAAGGCCAT GGCCAAGTTT TGTGGACGCC CGATCCGGAA CAGCTGCAGT CCAGCCGGCT TGTGAAATAC CAGCAATGGC TCTCCACCGA AAAGGGCGTG CACACCCAGG ATTACGATGA ACTGTGGCGC TGGTCAATCG AGGACTTGCC AGGCTTTTGG CAGTCCATCT GGGACTTCTT TGAAGTTCAA GCGGATGGAG AGCGGGAGCC TGCGATGGTT GGCGAGCAGA TGCCCGGTAT CCAGTGGTTC CCGAACGCAC GCCTGAACTT TGCGGAGCAC GTTTTCCGCA ATGCCACCTC CGCGCACCCG GTGATGCTCG CCCACACGGA AGGCGCCCCG CTTCGGGAAA TATCCTGGGA AGAGCTGGAG CGCACGACTG CGGCGCTGGC GGCACAGCTG CGCAGTTGGG GCGTGCAACC CGGTGACCGC GTGGCCAGCT TCATGCCCAA TCTCCCGGAA ACCGTGATCG CCTTCCTGGC CTGCGCCAGT GTCGGCGCCA TCTGGTCCAG CTGCGCACCC GACATGGGGG CAAACGTGGT GCTGGACCGC CTGCGCCAGA TCGAGCCCAA GGTGCTTTTC GCGACCGACA GCTACAGCTA CAACGGCAAG AATCACGACC GGTCTGTGGT GGTGAACGAA CTGCTGGCAG GGCTGCCCAG CGTGCAGCGG GTGGTGCAGG TTTCGGGGCC GCTGGACGGA AGTCGTCCCT TGCCGTGGCG CAATCATTGC TCTTGGCAAG ATTGTGTAGC GGGGAGCGCA ACACCGCGCT ACGAACGGCT GCCTTTCAGC CACCCCTTGT GGATTCTGTA TTCCTCCGGA ACGACCGGGC TGCCCAAGGC CATCGTGCAC AGCCACGGTG GCATTGTGCT GACGCACCTG AAATCGATGG CGCTGCAAAA CGATCTGCGG CCGGGTGATC GGTTGATGTT TCTGGGTAGC ACCGGGTGGG CTGTGTGGAA CCTTCAGGTG GGCGCCCTGC TGTCGGGCGC ATCCATTGTT CTCTACGACG GCAACCCTGC CTGGCCAACG GGCGATGCGC TGTGGCGCTT CATGGATGAA CATGGTGTGA CGCAGTTGGG CTGCGGAGCG GCTTACCTCA TCAATTGCAT GAAGGATGGC GTGCGCCCCC GGGACTTCGC AAAGTTGTCC AAACTCCGCA CCATCCTCTC CACCGGTTCG CCGCTGTCGA TGGATGCCTA CCACTGGGTT TACGACGCGG TCAAACCTGA TGTATGGCTG GCCTCCATCA GTGGCGGGAC GGATATTGCC GCGTGCTTCG TGGCCTGCGC CCCTACTTTG CCGGTGCACG CCGGCGAGAT TCAATGCCGG GAACTTGGCG TGGCCGCCTA CGCCTGGAAC GACGCTGGCG AGCCGGTGGT CAACGAGGTG GGCGAGTTGG TCATCACCCA ACCCATGCCG TCGATGCCCC TTTATTTCTG GAACGACACG GGCAACAAGC GCTACCTGGA GAGCTATTTT GAAACCTATC CTGGCCTGTG GCGCCAGGGT GACTGGATAC GCTTCACAGA GCACGGCAGC GCAGTCATCT ATGGGCGATC AGACAGCACG ATCAACCGCT TTGGCATCCG GATGGGAACG GCTGAAATCT ACCGGGTGGT TGAAGAAATG CCCGAGGTGC GCGACAGCCT GGTCATCGAC CTGGAGTTTT TGGGGCGCCC CTCGTTCATG CCGCTGTTTG TGGTGCTGCA ACCCGGCGCG GTTTTCGACG AGGTACTGCA GGAACGCATC AAGCACCAGA TACGCTCCAA GGCCTCTGCG CGCCACGTCC CCAACGAGGT GGTGCAGGTG ACTGAAATTC CTCGCACGCT GAGCGGAAAA AAGATGGAAG TGCCTGTCCG GAAACTGCTG TTGGGTAGCT CGCCTGACAA GGCGGCCAGC CCGGATTCAA TGCAGAACCC GACCAGCCTG GATTTTTTTG TCCAGTATGC GAAGGCCCTC AAGGTGAAGG AGATTTCAAC ATGA
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Protein sequence | MQENTPPEGH GQVLWTPDPE QLQSSRLVKY QQWLSTEKGV HTQDYDELWR WSIEDLPGFW QSIWDFFEVQ ADGEREPAMV GEQMPGIQWF PNARLNFAEH VFRNATSAHP VMLAHTEGAP LREISWEELE RTTAALAAQL RSWGVQPGDR VASFMPNLPE TVIAFLACAS VGAIWSSCAP DMGANVVLDR LRQIEPKVLF ATDSYSYNGK NHDRSVVVNE LLAGLPSVQR VVQVSGPLDG SRPLPWRNHC SWQDCVAGSA TPRYERLPFS HPLWILYSSG TTGLPKAIVH SHGGIVLTHL KSMALQNDLR PGDRLMFLGS TGWAVWNLQV GALLSGASIV LYDGNPAWPT GDALWRFMDE HGVTQLGCGA AYLINCMKDG VRPRDFAKLS KLRTILSTGS PLSMDAYHWV YDAVKPDVWL ASISGGTDIA ACFVACAPTL PVHAGEIQCR ELGVAAYAWN DAGEPVVNEV GELVITQPMP SMPLYFWNDT GNKRYLESYF ETYPGLWRQG DWIRFTEHGS AVIYGRSDST INRFGIRMGT AEIYRVVEEM PEVRDSLVID LEFLGRPSFM PLFVVLQPGA VFDEVLQERI KHQIRSKASA RHVPNEVVQV TEIPRTLSGK KMEVPVRKLL LGSSPDKAAS PDSMQNPTSL DFFVQYAKAL KVKEIST
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