| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2120 |
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| Symbol | |
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| ID | 4688458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2258122 |
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| End bp | 2259000 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639835131 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_982350 |
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| Protein GI | 121605021 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.112359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.184045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCC GCCAACTCCG CTACTTTCTC GACATTGCCC AGACCGAGCA CCTGACGCAA
TCGGCACAAA ACCTGTTCGT GACCCAGTCC ACGCTGTCGC ACGGCCTGCG CCAGCTGGAG
CAGGAGTTGA ACGTGACCCT GTTCGACCGG CTGGGGCGGG GCCTGAAGCT GTCGCAAGCC
GGGGCCGAAT TTCGCGTCTA TGCCACCCGT GCCTTGAAGG AAATCGAGGC CGGCCGCATG
GCGCTGGCCG ACCTGAGCGG GCTGCAGTCC GGCAAGCTGA CGGTGGGCGC CTTTCCGACT
TTCCTGAACA CGGTGGTGCC GGCCACGGTG GCCGCCTTCA GCCAGGCGCA CCCTCGGGTG
ATGGTGGAGG TGCGCGACTT GCGCGCCGGC TCGATTGAGG CTTTGCTGCT GCGCGGCGAG
CTGGACCTGG GCATTGCCTT TCACCCGACC GAACACGAGG AGATCGAGAC CGAGCCGCTG
TTCGACGAGC GCATGCTGCT GGTGGTAGGC GCCTTGCATC CCTTGGCGGG GCGACGCAGC
CTGGCCATGA AAGCGCTGGC GGGCATGCCG CTGGCGCTGT TGCCGCGCAG CTTTGCCACG
CGCCGGCTCA TTGACGCCAG CCTGCGTCAG GCCGATGTGG CGCCGACGGT CAGGGTGGAA
ATGGATTCGG TGGAAGCCTT GCTGGGCGTG TGCCGCCACA GCGACCTGGC GAGCATCGTG
CCCGAACGCG CCGCGCGGCA GGCGCCGGAT CTGCACGCCA TCGCGCTGAC CGAGCCGCAG
ATGGTGCGCC ACGCTGGCAT TTTGTGGCGG CGCGGTGCCT CGCGCAGCGC GGCGGCGCGG
GCCTTTGCGG CCCTGCTGCT CACAACGCCG CTGCGCTGA
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| Protein sequence | MEIRQLRYFL DIAQTEHLTQ SAQNLFVTQS TLSHGLRQLE QELNVTLFDR LGRGLKLSQA
GAEFRVYATR ALKEIEAGRM ALADLSGLQS GKLTVGAFPT FLNTVVPATV AAFSQAHPRV
MVEVRDLRAG SIEALLLRGE LDLGIAFHPT EHEEIETEPL FDERMLLVVG ALHPLAGRRS
LAMKALAGMP LALLPRSFAT RRLIDASLRQ ADVAPTVRVE MDSVEALLGV CRHSDLASIV
PERAARQAPD LHAIALTEPQ MVRHAGILWR RGASRSAAAR AFAALLLTTP LR
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