Gene Pnap_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1490 
Symbol 
ID4688016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1577946 
End bp1579148 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content59% 
IMG OID639834493 
Producthypothetical protein 
Protein accessionYP_981725 
Protein GI121604396 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC GTCCGGGCAG ATTCACCTTG GGAACACTCG CTGTGCAGTG TTTCATGACC 
ACAGCCTTGG TGGCGGCATC GTTTCAAAGC GCAGCCACCG ATCTGATTGC CTCAACCAAT
GATGCCAAGT ACCAACGCGT GGTGGGCAAG GACACGTTTC TGGAAAATCC GCAACCAGAC
ACGCTGGACA TCATCGACGC CAGCCATTTT CCGCCCCGCG TCGTCGCCAG CGTCAATGTG
GCCGCTGCCA TCCAGGGTCC GCCCCAAGCG GTGGCCATCA CACCAGACGG CAAGCTGGCC
ATCGTGTCGG CACCGAGCCG ATACGACACG GCGGAAAAGA AACTGCTTCT CGAAAACTAC
CTTCAGGTGG TGGATTTGAC ATCCAGCCCG GCTTCGGTCA TTGCAAAAGT TGACATTGCC
CATCATCCGC AGGCCATCGC CATCAACCGT GCCGGAAACC TGCTGCTGGC AACCACCACT
TCAGGCCATT TGCTGGTGTT TGCCATAGAC GGCAAATCGA TCACGCTCAA GGACACGTTA
AAGCTCAGCG ACAAGCGCCT GTCAGGCATC ACGATCACAC CTGACGGCAA GACCGCGCTG
GTGGCACTGC GCGATGAGCA GGGCCTGATG GTGCTGGATA TTGACAGCGA CAAGGTCACG
ACGCAACGCG AAAGGATCAG CACTGGCGTG GCGCCTTATT CGGTCGATGT ATCGAGCACC
GGCAAATGGG CACTGGTCGG CAACGCGGGG CTTGCCGGAT TGCCCGGAAA CGTGGGCACC
CTGGCGGGCG ACGTCGATTC CATCACACTG ATTGATATCT CCAGGCGTCC TTACCGCGCC
GTTCAGCATG TTTCCGTGGC CGCATTGCCT GAAGGGATTG CGATCTCGCC GGACGGCCGC
TGGGTCGCGG TCCAGAGCAT GGATGGATCA AACCTCACGG CTGACAACCC AGGGCGGCGG
GCCAAGGGCA AACTGATTCT GTTTTCCAAC CAGAATGGCA AGCTGGTGGA AAAAGCCAGC
CTTCCGGCGG GCGAAGCCGG ACAAGGGATT GTCTTTACGG CAGATGGCCG ATACATCCTG
GCGCAGTTCA ATGTCGAAAA GCAAGTGGCG GTTTTTGCCG TAGCCAACGG CAAGCTCAAG
GACACCGGCA AACGCCTTGC GTCAACCGGC GGGCCTTCAT CCATACGCTC CATGCCCCGC
TAA
 
Protein sequence
MIKRPGRFTL GTLAVQCFMT TALVAASFQS AATDLIASTN DAKYQRVVGK DTFLENPQPD 
TLDIIDASHF PPRVVASVNV AAAIQGPPQA VAITPDGKLA IVSAPSRYDT AEKKLLLENY
LQVVDLTSSP ASVIAKVDIA HHPQAIAINR AGNLLLATTT SGHLLVFAID GKSITLKDTL
KLSDKRLSGI TITPDGKTAL VALRDEQGLM VLDIDSDKVT TQRERISTGV APYSVDVSST
GKWALVGNAG LAGLPGNVGT LAGDVDSITL IDISRRPYRA VQHVSVAALP EGIAISPDGR
WVAVQSMDGS NLTADNPGRR AKGKLILFSN QNGKLVEKAS LPAGEAGQGI VFTADGRYIL
AQFNVEKQVA VFAVANGKLK DTGKRLASTG GPSSIRSMPR