Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1490 |
Symbol | |
ID | 4688016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1577946 |
End bp | 1579148 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639834493 |
Product | hypothetical protein |
Protein accession | YP_981725 |
Protein GI | 121604396 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGC GTCCGGGCAG ATTCACCTTG GGAACACTCG CTGTGCAGTG TTTCATGACC ACAGCCTTGG TGGCGGCATC GTTTCAAAGC GCAGCCACCG ATCTGATTGC CTCAACCAAT GATGCCAAGT ACCAACGCGT GGTGGGCAAG GACACGTTTC TGGAAAATCC GCAACCAGAC ACGCTGGACA TCATCGACGC CAGCCATTTT CCGCCCCGCG TCGTCGCCAG CGTCAATGTG GCCGCTGCCA TCCAGGGTCC GCCCCAAGCG GTGGCCATCA CACCAGACGG CAAGCTGGCC ATCGTGTCGG CACCGAGCCG ATACGACACG GCGGAAAAGA AACTGCTTCT CGAAAACTAC CTTCAGGTGG TGGATTTGAC ATCCAGCCCG GCTTCGGTCA TTGCAAAAGT TGACATTGCC CATCATCCGC AGGCCATCGC CATCAACCGT GCCGGAAACC TGCTGCTGGC AACCACCACT TCAGGCCATT TGCTGGTGTT TGCCATAGAC GGCAAATCGA TCACGCTCAA GGACACGTTA AAGCTCAGCG ACAAGCGCCT GTCAGGCATC ACGATCACAC CTGACGGCAA GACCGCGCTG GTGGCACTGC GCGATGAGCA GGGCCTGATG GTGCTGGATA TTGACAGCGA CAAGGTCACG ACGCAACGCG AAAGGATCAG CACTGGCGTG GCGCCTTATT CGGTCGATGT ATCGAGCACC GGCAAATGGG CACTGGTCGG CAACGCGGGG CTTGCCGGAT TGCCCGGAAA CGTGGGCACC CTGGCGGGCG ACGTCGATTC CATCACACTG ATTGATATCT CCAGGCGTCC TTACCGCGCC GTTCAGCATG TTTCCGTGGC CGCATTGCCT GAAGGGATTG CGATCTCGCC GGACGGCCGC TGGGTCGCGG TCCAGAGCAT GGATGGATCA AACCTCACGG CTGACAACCC AGGGCGGCGG GCCAAGGGCA AACTGATTCT GTTTTCCAAC CAGAATGGCA AGCTGGTGGA AAAAGCCAGC CTTCCGGCGG GCGAAGCCGG ACAAGGGATT GTCTTTACGG CAGATGGCCG ATACATCCTG GCGCAGTTCA ATGTCGAAAA GCAAGTGGCG GTTTTTGCCG TAGCCAACGG CAAGCTCAAG GACACCGGCA AACGCCTTGC GTCAACCGGC GGGCCTTCAT CCATACGCTC CATGCCCCGC TAA
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Protein sequence | MIKRPGRFTL GTLAVQCFMT TALVAASFQS AATDLIASTN DAKYQRVVGK DTFLENPQPD TLDIIDASHF PPRVVASVNV AAAIQGPPQA VAITPDGKLA IVSAPSRYDT AEKKLLLENY LQVVDLTSSP ASVIAKVDIA HHPQAIAINR AGNLLLATTT SGHLLVFAID GKSITLKDTL KLSDKRLSGI TITPDGKTAL VALRDEQGLM VLDIDSDKVT TQRERISTGV APYSVDVSST GKWALVGNAG LAGLPGNVGT LAGDVDSITL IDISRRPYRA VQHVSVAALP EGIAISPDGR WVAVQSMDGS NLTADNPGRR AKGKLILFSN QNGKLVEKAS LPAGEAGQGI VFTADGRYIL AQFNVEKQVA VFAVANGKLK DTGKRLASTG GPSSIRSMPR
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