| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1474 |
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| Symbol | |
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| ID | 4688981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1561555 |
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| End bp | 1563900 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834477 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_981709 |
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| Protein GI | 121604380 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.517963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCTGC CGGCCACGCA TGCCTTGATT CTCGCGGGGG CCGGCTCGGG CAAGACCCGC
GTGCTGACCA CGCGCATCGC CTGGCTGCTG CAAACCGGGC AGGTCTCGCC CGGCGGCATC
CTGGCCGTGA CCTTCACCAA CAAGGCGGCC AAGGAAATGC TGACCCGCCT CTCGGCCATG
CTGCCCATCA ATGTGCGGGG CATGTGGATA GGCACCTTCC ACGGCCTGTG CAACCGATTT
TTGCGCGCCC ACTACAAGCT GGCCAATCTG CCATCGACCT TCCAGATTCT GGACACGCAG
GACCAGCTAT CGGCCATCAA GCGATTGAGC AAGCAGTTCG GCATTGATGA CGAGCGCTTT
CCGCCCAAGG ATTTGATGCG TTTCATTGCC GGCTGCAAGG AAGACGGCCT GCGCGCGAAA
GACGTGCCTG CGCACGATGA GAACAGCCGC AAGAAGGTCG AGATCTACGA CCTCTACGAG
CAGCAGTGCC AGCGCGAAGG CGTGGTCGAT TTCGGCGAAC TGATGCTGCG CAGCTATGAG
CTGCTGCGTG ACAACGCCCC GATACGCGAG CACTACCAGC GGCGTTTTCG CCACATCCTG
ATCGACGAGT TCCAGGACAC CAACAAGCTG CAATACGCCT GGATCAAGAT GCTGGCCGGG
CAGGGCGCGG ACGCGATGGA GTCCATGCCC GGCGGTTCGG TGGTGGCCGT CGGCGACGAT
GACCAGAGCA TCTACGCCTT TCGCGGCGCG CGTGTGGGCA ACATGGCCGA CTTCGTTCGC
GAATTCAATG TCACCCACCA GATCAAGCTG GAGCGCAATT ACCGCAGCTT CGGCAACATC
CTCGATTCAG CCAATGCGCT GATCAGCCAC AACACCCAGC GCCTTGGAAA AAATCTGAGT
ACCGAAGCCG GTCCGGGCGA GCCGGTGCGC GTGTATGAAT CGGCCAGCGA TTTTGCCGAG
GCGCAATGGT TTGTCGATGA GGTCAGGCAA CTGGTGCGTG ACGGCGCTGA GCGCAAGGAA
ATCGCGCTGC TGTACCGCAG CAACGCGCAA AGCCGGGTGA TGGAAAGCGC GCTGTTCAAT
GCCAGCATTC CCTACCGGGT GTACGGCGGC CTGCGGTTTT TCGAGCGCGC CGAAATCAAG
CACGCGCTGG CCTATTTGCG CCTGCTCGAC AACCCGCACG ACGACACCAG CTTCATGCGC
GTGGTGAACT TTCCGCCGCG CGGCATCGGC GCCCGGACCA TCGAGCAACT GCAGGATATT
TCGAACGCTT CGGGCTGCTC GCTGCATGAC GGCGTGAGCG CGGTGCCCGG CAAGGCTGGC
GCCAATCTGG GTGCATTCGT GGCCAAACTG GACGTGATAC GCGAGCAGAC CGCCGGCTGC
ACGCTGCGCG AAATCATCGA ACTCGTGCTG CAGCAGAGCA GCCTTGTCGA ACACTACACG
CTGGACAAAG ACGGCCAGGA CCGGCTCGAA AATCTGGCCG AACTGGTGAA CGCCGCCGAG
TCCTTCGTCA GCCAGGAAGG CTTTGGCCGC GATGCCGTGG CGCTGCCGGT CGATGAGCTG
GGCGCGGGCT TGACGCAGTC GCCCGCCAGC CAGGGGCTGG ACGAGCCCTT GTCCGAGCAG
CTCGCACCCA ACCTGGAGAC CGGTGAGACG CTGTCGCCGC TGGTGGCCTT TCTGACGCAT
GCGGCGCTGG AGTCGGGTGA CAACCAGGCG CAGGCCGGCC AGGACGCGGT GCAACTCATG
ACGGTGCATT CGTCCAAGGG GCTGGAGTTT GACTGCGTGT TCATCACCGG GCTGGAAGAC
GGCATCTTTC CGCATGAAAA CGCCTTGAAC GACGCCGGCG GCATCGAGGA AGAGCGCCGG
CTGATGTATG TCGCCATCAC CCGGGCGAGG AAGCGCCTGT ACCTGAGCCA TTCGCAGACC
CGCATGCTGC ACGGCCAGAC GCGCTACAAC CGCAAGAGCA GGTTTTTTGA TGAACTGCCC
GAAGGCGCGC TCAAGTGGCT CACGCCAAGA AACAGGGGTT TTGCGTCCGG CCTGGGGTCG
GGCTCGGGCA ACTGGGGTGG TGCTAGCAAT TCAGGAGCTG GTAGCGCGCG TGGGGATTGG
GCTGGAGGCG GATTTCATTC AAAATCCGGC AGTGCCGAAC GCTTTGCCAG CCCGCCGGTG
CCGGCGCAAA AGAGCGCGCC CTCGCATGGC CTGAAAAGCG GCATGAATGT GTTCCATGCC
AAGTTTGGCG AAGGCCGGGT GGAAATGCTC GAAGGCACGG GTGATGACGC CAGGGCGAAA
ATCAATTTCA CCCGGCATGG CGTGAAATGG CTGGCGCTGA GCGTGGCCAA GCTGACGGTG
ATCTAG
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| Protein sequence | MTLPATHALI LAGAGSGKTR VLTTRIAWLL QTGQVSPGGI LAVTFTNKAA KEMLTRLSAM
LPINVRGMWI GTFHGLCNRF LRAHYKLANL PSTFQILDTQ DQLSAIKRLS KQFGIDDERF
PPKDLMRFIA GCKEDGLRAK DVPAHDENSR KKVEIYDLYE QQCQREGVVD FGELMLRSYE
LLRDNAPIRE HYQRRFRHIL IDEFQDTNKL QYAWIKMLAG QGADAMESMP GGSVVAVGDD
DQSIYAFRGA RVGNMADFVR EFNVTHQIKL ERNYRSFGNI LDSANALISH NTQRLGKNLS
TEAGPGEPVR VYESASDFAE AQWFVDEVRQ LVRDGAERKE IALLYRSNAQ SRVMESALFN
ASIPYRVYGG LRFFERAEIK HALAYLRLLD NPHDDTSFMR VVNFPPRGIG ARTIEQLQDI
SNASGCSLHD GVSAVPGKAG ANLGAFVAKL DVIREQTAGC TLREIIELVL QQSSLVEHYT
LDKDGQDRLE NLAELVNAAE SFVSQEGFGR DAVALPVDEL GAGLTQSPAS QGLDEPLSEQ
LAPNLETGET LSPLVAFLTH AALESGDNQA QAGQDAVQLM TVHSSKGLEF DCVFITGLED
GIFPHENALN DAGGIEEERR LMYVAITRAR KRLYLSHSQT RMLHGQTRYN RKSRFFDELP
EGALKWLTPR NRGFASGLGS GSGNWGGASN SGAGSARGDW AGGGFHSKSG SAERFASPPV
PAQKSAPSHG LKSGMNVFHA KFGEGRVEML EGTGDDARAK INFTRHGVKW LALSVAKLTV
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