Gene Pnap_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1021 
Symbol 
ID4686235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1079782 
End bp1080753 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content63% 
IMG OID639834020 
Producthypothetical protein 
Protein accessionYP_981259 
Protein GI121603930 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.345353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.559311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCC CCCATCTCGC CCTTTCACTG CTCGCCGCAC TCGGCATGCA TTCCGCCATG 
GCTGCCGAAG CCTATCCGGC CAAACCTGTT CGCTGGGTGG TGGCGTTTTC CGCTGGCGGA
GGGTCGGATA TCCTGGCCCG CACCGTCGGC CTTCAGTTGT CAAAGCAGCT GGGCCAGCAG
ATCGTGGTGG ACAACAAGCC GGGCGGTGCG ACCGTCATCG CCGCCGAGAG CGTGGCCCGG
TCGCCCGGCG ACGGCTACAC CGTGTTCACC GCTGACAACG GCACGCTGAT CTTCAACACG
GCGCTGTTCA AAAGACTGTC GTACGAGCCG AAAAAAGACT TCGCGCCGAT TGGCATGATG
GCGCGCTTCC CGCTGGTGCT GGCCACGAAT CCGGCGTCCG GTTTCGCCAC CGCCAAAGAG
GCGATTGAAG CCATGAGAAA GCAGCCTGGA AAGTTCAGCT ATGCCTCGTC GGGCGTCGGA
AGCCCCCATC ACCTTGCGAT GGAAATGCTC AAGGAGCGGG CCAGGATCGA CGTGACGCAT
GTGCCTTACA AAGGCGGAGC GCCCGCCGTC CAGGACGTGG CAGGCGGCCA GCTTCCGTTT
ATCGTCATCG ACATCGCCAC CGGCCTGCCG ATGATCAAGG CCGGAAAGCT CAAGGTTCTG
GCGACTTTTT CCAAGTCGCG CCTGGCTGCC ATGCCTGACG TGCCGACCCT GATGGAGCTG
GGCTATACCG ACATCGAGGC GACCGCCTGG CAGGGCTTGG TGGTGCCCGC CAGCACGCCA
AAGGCGATCC AGGACCAGTT GAGCAGCGAA TTGCAAAAGG CCATCAACGT TCCAGCCGTC
AGCGCGCGCC TGGTCGAGTT GGGCGTCGAG CCCCTGCCCT CGGATGCGGC CGCCATGAAC
AAGCGTTGGT CGGACGACGC GGCCTACTGG CCCAAGCTGA TCAAGGACCG GCAGATCACG
CTGGACCAGT AA
 
Protein sequence
MKLPHLALSL LAALGMHSAM AAEAYPAKPV RWVVAFSAGG GSDILARTVG LQLSKQLGQQ 
IVVDNKPGGA TVIAAESVAR SPGDGYTVFT ADNGTLIFNT ALFKRLSYEP KKDFAPIGMM
ARFPLVLATN PASGFATAKE AIEAMRKQPG KFSYASSGVG SPHHLAMEML KERARIDVTH
VPYKGGAPAV QDVAGGQLPF IVIDIATGLP MIKAGKLKVL ATFSKSRLAA MPDVPTLMEL
GYTDIEATAW QGLVVPASTP KAIQDQLSSE LQKAINVPAV SARLVELGVE PLPSDAAAMN
KRWSDDAAYW PKLIKDRQIT LDQ