Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0441 |
Symbol | |
ID | 4687998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 459474 |
End bp | 460394 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639833438 |
Product | LysR family transcriptional regulator |
Protein accession | YP_980684 |
Protein GI | 121603355 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.253414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCA GGCAACTCGA AGTCTTTCAG GCCGTCATGC AAACCGGCAA CATGAGCGCG GCCGCGCGGC TGATCTGCAT CACGCCCTCG GCGGTCAGCA AAACCATCGG GCACACCGAG CTGCAACTGG GCTACAAGCT GTTCGTCAGG GCCAAGGGCA CGCTGGCGCC CACGCCCGAG GCGCGCGTGC TGTTCGAAGA GTCCACCCTG ATCCACCGCA AGCTCGATGA ACTCAAGCGC ATGGCCATCA ACCTGCGCCA GGTCGATGGC GGACAGGTGC GGCTGGCGGC CCTTCCGTCG ATCAGCCACG AGTTCTTGCC GCTGGTGCTG GAGCAGCATT TGACGCGCTA TCCGCGCGTC AATGTGGAGG TGCGCACGCT GCACCAGGAC CAGATGGTCG AGGCGCTGCT GACCCGGCGC GTGGACTTTG CGCTGGGTTT TTACACGCAT CCGCACCCGC TGCTGACCAA TACCGTGCTG GTGAGCGGGC TGCTGCACCT GGTCGTCAAG GCCGACATCT GGGAGCGCGC GGTGCGGGCG CGGCGCCAGA ACCCGATGTC TTTCCTGACC AGCATGCCGC TGGTCCGGCT GGTGGGCGAA GACCCGATGT GCCAGTCGAT TGACGCGCTG GCCCGCCACT TGGGGCACAC GGCAACGACA GGCCTGCAGG TGCATACCTC GCGGCTGGCG CTGGAACTGG TCAGGCGGGG CATGGGCTGG ACGGTGGTGG ACTTCCTGAC CGCCCGCAAT CTCGATGCGT CGCTCACGGC CGTGCCGCTG CATGACTTTG CGTCGATTTC GCTGCAGATG TATGTGGCCA CCAGCACGCC GCCCAGCCAG GATGCCCTGC GCATGGTCGG CATGCTGCCC GGCCTGCTGC ACCAGATGAT GGAAAGCAGC CCGCCGCCCC GCCGGGAATG A
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Protein sequence | MNLRQLEVFQ AVMQTGNMSA AARLICITPS AVSKTIGHTE LQLGYKLFVR AKGTLAPTPE ARVLFEESTL IHRKLDELKR MAINLRQVDG GQVRLAALPS ISHEFLPLVL EQHLTRYPRV NVEVRTLHQD QMVEALLTRR VDFALGFYTH PHPLLTNTVL VSGLLHLVVK ADIWERAVRA RRQNPMSFLT SMPLVRLVGE DPMCQSIDAL ARHLGHTATT GLQVHTSRLA LELVRRGMGW TVVDFLTARN LDASLTAVPL HDFASISLQM YVATSTPPSQ DALRMVGMLP GLLHQMMESS PPPRRE
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