Gene Pnap_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0435 
Symbol 
ID4687623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp450012 
End bp450920 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content68% 
IMG OID639833432 
Productputative lipase transmembrane protein 
Protein accessionYP_980678 
Protein GI121603349 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCAT CGCTGCAACG GCTCATCACC CTGTCGATCA TCGCTGCGGC GGTTGGCTGG 
CTGCTGTACT TCGGCCGTGG CTCGCCGGTT CTGGGTTTTG CGGGTTTCAT GGCGATTGCG
CTTGCCTACT CTGTGTTTCT TGCTATCGAA TTCATACTGG TCAAGCAGGT GAACAAGGGC
GATCCGGTGC CCCAGCCCAG CTGGCGCGAA CTGCTGGCCG CCTGGCTGGG CGAAAGCGTG
ACCGCGCCCC GGGTTTTCTG CTGGCGCCAG CCCTTCCGCC CGAATGCCGT GCCGGACCAG
CTCGGACCGC CAGCGCGGGT GCGGGGCCGC CGGGGTGTGG TGTTCGTGCA TGGGTTCTTT
TGCAACCGGG GCCTGTGGAC GCCCTGGCTC AAGCGCCTGC AGGGCAGTGG CCGGGCCTTC
GTGGCCGTCA ACCTGGAGCC GCTGCTGGGC TCGATTGACG ACTATGCGCC GCAGATTGAC
GACGCGGTCC GGCGCGTGAC CGAGGCCACC GGACAGCCGC CGCTGCTGGT CTGCCACAGC
ATGGGCGGCC TGGCGGTCCG GGCCTGGCTC AAGCTGATGC AGGCCGAGGC GCGCGTGCAC
CATGTGGTGA CGATTGGCAC GCCGCACCGG GGCACCTGGC TGGCGCGTTT TGGCCAGGGC
CACAATGGCC GTCAGATGCG CCTGCTGTCG GACTGGCAGG CGCAGCTGGA CCATGGCATG
CCTGCCGGCC GCCATGCGCT GTTTACCTGC TGGTATTCGA ATTGCGACAA CATCGTGTTC
CCGGCATCGA CCGCGACGCT GCCGGGCGCC CGCAACCGGC TGGTTCGCGG CGCGGCGCAT
GTGCAGCTGG CGTTTGTGCC ACGGGTCATG CAGGCAACGC TGGCCTTGCT GGACGAGCGC
CCGGCTTGA
 
Protein sequence
MLASLQRLIT LSIIAAAVGW LLYFGRGSPV LGFAGFMAIA LAYSVFLAIE FILVKQVNKG 
DPVPQPSWRE LLAAWLGESV TAPRVFCWRQ PFRPNAVPDQ LGPPARVRGR RGVVFVHGFF
CNRGLWTPWL KRLQGSGRAF VAVNLEPLLG SIDDYAPQID DAVRRVTEAT GQPPLLVCHS
MGGLAVRAWL KLMQAEARVH HVVTIGTPHR GTWLARFGQG HNGRQMRLLS DWQAQLDHGM
PAGRHALFTC WYSNCDNIVF PASTATLPGA RNRLVRGAAH VQLAFVPRVM QATLALLDER
PA