Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0294 |
Symbol | |
ID | 4686838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 294562 |
End bp | 295128 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639833286 |
Product | hypothetical protein |
Protein accession | YP_980538 |
Protein GI | 121603209 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.223469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCAGG CCGCGCAAAA AATCATCTTT ACCGCCGCCG ACTATCTTGC GTGGGAGCCG GCGCAAGCAG AGCGCCATGA ATACATCGAC GGCGAAGTGT TTGCCATGGC CGGCGCCGAA GACCGGCATG TGACGGTGTC CATGAACCTG GCTTTCGCCC TGCGCCAGCA CCTCAGCAGC AGCCCGTGCC GCACCTATAT GAGCGACATG CGCCTGCACG TCGCCGCTGC CAACAGCTAC TTTTACCCTG ACGTGCTGGT GACCTGCAGC GCGCTTGACC TGGCCAGCCC GATGGTCAAG ACCGAACCCA AGCTGATTGC CGAAGTCTTG TCGCCCAGCA CCGGCGCCTA TGACCGGGGC GTGAAATTCA GCCACTACCG CAGCATTGCA AGCCTGGAGG AATACGTGCT GATCGACCTC GACACGCGCA GCACCGACTG TTTCCGCAAA GGCGAGGACG GGCTGTGGGT GCTGCACCCG TTTGCCCGTG GCGAGGCGGT GTCGCTGGCC AGCGTGGCGC TGGAGTTGAG CGCGGCGCAG TTGTTCGCGG AAGTGCCGGA GGTTTGA
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Protein sequence | MGQAAQKIIF TAADYLAWEP AQAERHEYID GEVFAMAGAE DRHVTVSMNL AFALRQHLSS SPCRTYMSDM RLHVAAANSY FYPDVLVTCS ALDLASPMVK TEPKLIAEVL SPSTGAYDRG VKFSHYRSIA SLEEYVLIDL DTRSTDCFRK GEDGLWVLHP FARGEAVSLA SVALELSAAQ LFAEVPEV
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