Gene Pnap_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0294 
Symbol 
ID4686838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp294562 
End bp295128 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content63% 
IMG OID639833286 
Producthypothetical protein 
Protein accessionYP_980538 
Protein GI121603209 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.223469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAGG CCGCGCAAAA AATCATCTTT ACCGCCGCCG ACTATCTTGC GTGGGAGCCG 
GCGCAAGCAG AGCGCCATGA ATACATCGAC GGCGAAGTGT TTGCCATGGC CGGCGCCGAA
GACCGGCATG TGACGGTGTC CATGAACCTG GCTTTCGCCC TGCGCCAGCA CCTCAGCAGC
AGCCCGTGCC GCACCTATAT GAGCGACATG CGCCTGCACG TCGCCGCTGC CAACAGCTAC
TTTTACCCTG ACGTGCTGGT GACCTGCAGC GCGCTTGACC TGGCCAGCCC GATGGTCAAG
ACCGAACCCA AGCTGATTGC CGAAGTCTTG TCGCCCAGCA CCGGCGCCTA TGACCGGGGC
GTGAAATTCA GCCACTACCG CAGCATTGCA AGCCTGGAGG AATACGTGCT GATCGACCTC
GACACGCGCA GCACCGACTG TTTCCGCAAA GGCGAGGACG GGCTGTGGGT GCTGCACCCG
TTTGCCCGTG GCGAGGCGGT GTCGCTGGCC AGCGTGGCGC TGGAGTTGAG CGCGGCGCAG
TTGTTCGCGG AAGTGCCGGA GGTTTGA
 
Protein sequence
MGQAAQKIIF TAADYLAWEP AQAERHEYID GEVFAMAGAE DRHVTVSMNL AFALRQHLSS 
SPCRTYMSDM RLHVAAANSY FYPDVLVTCS ALDLASPMVK TEPKLIAEVL SPSTGAYDRG
VKFSHYRSIA SLEEYVLIDL DTRSTDCFRK GEDGLWVLHP FARGEAVSLA SVALELSAAQ
LFAEVPEV