| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0222 |
|---|
| Symbol | |
|---|
| ID | 4686645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 227418 |
|---|
| End bp | 228149 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639833215 |
|---|
| Product | putative esterase |
|---|
| Protein accession | YP_980468 |
|---|
| Protein GI | 121603139 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.838594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.101854 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATT TTGTCCTGGT GCATGGCGCG TGGCACGGCG GCTGGTGCTG GCAGCGCGTG
ACGGCAGTGC TGCAGCGCGG CGGCCACCGC GTGCATGCGG TCACGCTGAC CGGCCTGGGC
GAGCGCGCCC ACCTGCTGTC GCCCGCCATC ACGCTCGACA CCCACATCGA CGACGTGATC
AACCTCATCG AGGCCGAAGA GCTGCTGGAC GTGGTGCTGG CGGTGCATTC CTACGCCGGC
ATGATCGGCA CGGCGGTGGC CGACCGGCTG GGCCAGCGCC TCAAGCACCT GGTGTATGTC
GATGCGGTCG TGCCCAAGCC CGGCGAAAGC TGGAGCAGCA CGCAGTCCAG CGCCACGCAG
CAGCAGCGCC TGGCCGCTGC GCAGGCGTCC GCGCATTTCA GCTTTCCGCC GCCCGACCCG
GAGGTGTACG GTCTCAAGGA TGACGACCGC GAATGGGTCA AGCGCCGCCA GACGCCGCAC
CCCGGCAACA CCTACCAGGC GCCGCTGGAC TTTGACGTGC AGCGCGTCGC CGCCGTGCCG
CGCACCTTCG TCAGCTGCAC CGAGCCGGCG CTGGCGACGA TTGCGCCCAG CCGGCTGCGG
GCCAAGGACC CGAAATTCTG GGACGGCGCC TGGCTGCCGG GCGCCAGCAC CATCGAGCTT
CAAACCGGCC ACGACCCGAT GGTCAGCGAG CCTGCGGCGC TGGTGCGGAT TCTGCTGGGG
TGCGGCGCGT AA
|
|---|
| Protein sequence | MANFVLVHGA WHGGWCWQRV TAVLQRGGHR VHAVTLTGLG ERAHLLSPAI TLDTHIDDVI
NLIEAEELLD VVLAVHSYAG MIGTAVADRL GQRLKHLVYV DAVVPKPGES WSSTQSSATQ
QQRLAAAQAS AHFSFPPPDP EVYGLKDDDR EWVKRRQTPH PGNTYQAPLD FDVQRVAAVP
RTFVSCTEPA LATIAPSRLR AKDPKFWDGA WLPGASTIEL QTGHDPMVSE PAALVRILLG
CGA
|
|---|
| |