Gene Pmen_4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4222 
Symbol 
ID5106646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4627535 
End bp4628644 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content66% 
IMG OID640505486 
Producthypothetical protein 
Protein accessionYP_001189701 
Protein GI146309236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATTG GTATTTCCCG CCTGCTCGTG CAAGGCAGCC CAGCCGACGA CCTGTTGGTC 
GCCCACCCCG AACCGAGCCG CCTGGTCGGT GGCGATGGCA ACGACGTGCT GATCGACGGC
CCCGGCAGCG ACTCGCTGCT CGGCGGCGGT GGCGTGAACC GCCTGTATGG CGGGCTCGGC
GACGACTACT ACACCTACGA CATCAACGCA GACGGTCGGG ACGTGATCCT CGACTTCGAC
CCCACGCCCG GCAACATCGA CACCCTGATC ATCAACGAGA GCCTGGAAGA GTTCGGCCCG
TTCGAGCGCT ATCAGGACGA CCTGCTGATC GGTCTGTACA GCACGCCGGC AGTGGTGACC
ATACGCAACT TCTTCCTCGA CCCCGCGTTT CGCATCGAAC GCTTTCGCTT CGGCGCCGTG
CAGGTCACCG ACAAGGATAT TCTGCGCAGC TTCCACATCG ACCCGCTGGC CCCGCCCGGC
CGCACCTCGG ACGATCCGCC CAGCTACACC GGCGAGCGCA TCCGCCTGAC CGGCAAGGAA
TGGGCCGACA GGCTGGTGGC GGGTGACCAG CCGACCTACA TGCTCGGCCG CGGCGGCAAC
GACCTGATGA TCGGCAGCCG GCACAGCGAC GTGCTCAACG GCGGCACGGT CAAGCCGATG
TTCTTCGGCG ACAATCAGTG GAACCAGCTC TACGGCGGGC CCGGCAACGA CTACTACCAG
GTCGACTACA GCTGGGATTT CAGCAACCAC CGCATCTACG ACTACGACAC CACCCCCGGC
AACATCGACA CCCTGCAGAT CCGCGGCCCG GTGACCGCCG ACCAGGTGCG TCTGTATGGC
GTGCAGGGCG GCTCGCTGTC CATCGAGCTG GATACAGAGC AACGCATCGT CATCGTCAAC
TACCTGCTGG ACAAGGCCTT CGTGGTCGAA AGGATTCGCT TCGACGATGG CTCCGAACTG
AACGAGGCCA CCATTCGCCA GCGTCTCGGC CTGCCCGCCC CGACGCAGGC CAGCCTGCTC
ACGCCCGCGC CAGCCTGGGC CGGCGAGCCG CCGGCAGCGG CGGATGGCGT CGGCCTGCTG
CTGGCCGCAG CCGCGCTATG GGGCGGATGA
 
Protein sequence
MPIGISRLLV QGSPADDLLV AHPEPSRLVG GDGNDVLIDG PGSDSLLGGG GVNRLYGGLG 
DDYYTYDINA DGRDVILDFD PTPGNIDTLI INESLEEFGP FERYQDDLLI GLYSTPAVVT
IRNFFLDPAF RIERFRFGAV QVTDKDILRS FHIDPLAPPG RTSDDPPSYT GERIRLTGKE
WADRLVAGDQ PTYMLGRGGN DLMIGSRHSD VLNGGTVKPM FFGDNQWNQL YGGPGNDYYQ
VDYSWDFSNH RIYDYDTTPG NIDTLQIRGP VTADQVRLYG VQGGSLSIEL DTEQRIVIVN
YLLDKAFVVE RIRFDDGSEL NEATIRQRLG LPAPTQASLL TPAPAWAGEP PAAADGVGLL
LAAAALWGG