| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3871 |
|---|
| Symbol | |
|---|
| ID | 5106405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4257346 |
|---|
| End bp | 4258695 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640505125 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_001189350 |
|---|
| Protein GI | 146308885 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTC GTGTTGTAGC CGTACTGGCG CTCAGCCTGT TGCCGGCGCT GGCCGCCGTG
GCCGAAACCC TCAGTCCCGA TCAGCTGCTG CAGCGTATCC GCAGCGAGCG CGCCGCTGAA
GTCAGCGCCA TGCAGGAGCG CGAGCAGGCC TTCCTCGCCA AGCGCAGCGA GCAGGCGCAA
CTGCTGGCCG CCGCGCGCTC CGCACTGAAT ACCCAGAAAG CCGAAAGCGA GCGTCTGAAG
GCCGAATTCG ACCGTCAGGA AGCCGAGCTG GCCGAGCAGG AAAAACTGCT GGCGCAGCGT
GTCGGTCACC TTGGTGAGTT GTTCGGTGTG GTGCGTCAGA GCGCCGGCGA TGTAGCCGGA
CAGTGGCAGG ACAGCCTGCT CAACGCCCAG TATCCGGAGC GCCTGAAGCG TCTCAAGGCA
CTGGCCGAGA GCCGTTCGCT GCCGTCTGCC GAAGACCTCG ACGGCTACTG GATGCTGCTG
CTCGAAGACC TGGCCGCCAG CGGCCGTATC GAGCGTCTGC AACTGCCGGT GGTGAGCGCC
GACGGTTCGC GCCAGCAGCA GCAGGTGCTG CGTGTCGGTG CCTTCGCCGT GTACGGCGAG
GATGCCTTCC TGCGTTACGA CGCCGATGCC GGCGAGCTGG TAGCGCCGCC GCGTCAGCCC
TCGGGCCTGG GCCAGGTCAA GGACTACCTG AGCAGCCGCG ACGCACTCGC CTCCCTGCCC
ATCGACCCCA GCCGTGGCAG CCTGCTGGCG CAGCTGCAGC AGCAGCCGAC CCTGTGGGAT
CGTCTGCAGC AGGGTGGCCT GGTCGGCTGG GTGATCGTCG TGCTGGGTGC TCTCGGTCTG
CTGCTGGCGC TCTGGCGCAT GCTGTATCTG GGCCGTGTCG GCAGTGGCGT CAAGGCGCAG
ATGCATGACC TCAGCGCGCC GCGTGACGAC AACCCGCTGG GTCGGGTGAT CGGTGTGCTG
GGCGCCAAGC CGCAACTGGC TGACCTGGAG ACCCTGGAGC TGAAGCTGGA CGAGGCGATC
CTGCAGGAGA CCCCGCCGCT GGAAAAAGGC CAGGGCCTGC TCAAGCTGCT GGCCGCCGTG
GCGCCGCTGC TCGGTCTGCT GGGTACCGTG ACCGGCATGA TCGTCACCTT CCAGGCCATC
ACCCAGAGCG GTGGCGGCGA CTCGCGTCTG ATGGCCGACG GCATTTCCCA GGCCCTGGTG
ACCACCGTGC TGGGCCTGGT GGTGGCCATC CCGCTGCTGT TCCTGCATAG CCTGCTGGCC
AGCCGCAGCA AGGGCCTGAT CCAGATCCTG GAGCAGCAGA GCGCCGGTCT GATCGCCCTG
CATCTGTCGG GAGCGCCGCG CCGTGACTGA
|
|---|
| Protein sequence | MSRRVVAVLA LSLLPALAAV AETLSPDQLL QRIRSERAAE VSAMQEREQA FLAKRSEQAQ
LLAAARSALN TQKAESERLK AEFDRQEAEL AEQEKLLAQR VGHLGELFGV VRQSAGDVAG
QWQDSLLNAQ YPERLKRLKA LAESRSLPSA EDLDGYWMLL LEDLAASGRI ERLQLPVVSA
DGSRQQQQVL RVGAFAVYGE DAFLRYDADA GELVAPPRQP SGLGQVKDYL SSRDALASLP
IDPSRGSLLA QLQQQPTLWD RLQQGGLVGW VIVVLGALGL LLALWRMLYL GRVGSGVKAQ
MHDLSAPRDD NPLGRVIGVL GAKPQLADLE TLELKLDEAI LQETPPLEKG QGLLKLLAAV
APLLGLLGTV TGMIVTFQAI TQSGGGDSRL MADGISQALV TTVLGLVVAI PLLFLHSLLA
SRSKGLIQIL EQQSAGLIAL HLSGAPRRD
|
|---|
| |