| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3791 |
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| Symbol | |
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| ID | 5106022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4179786 |
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| End bp | 4180838 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505046 |
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| Product | lipoyl synthase |
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| Protein accession | YP_001189271 |
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| Protein GI | 146308806 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA CCTCCTCGCC CAAACCCGTC GCCAGCGGCG AAAAATTCCG CACCGCCCAA
GGCATCACCG CGATCAAGGA TGGTCAGAAG CGCCGTGCCT CGGCCGAGCC CCAGGTCTTC
GAGCCCAAGC CCAAATGGCT GCGGGTCAAG GCACCGGGCG GCAGCCGTTT CGAGGCGGTC
AAGCGCAACG TCGGCGAACA CCGCCTGAGC ACCGTGTGCC AGGAATCGCA TTGCCCGAAC
ATGGGCGAGT GCTGGTCCAA CGGCACCGCG ACCATCATGC TGATGGGCTC GGTGTGCACC
CGCGCCTGCC GCTTCTGCGC CGTGGACACC GGCAACCCCA ATGGCTGGCT GGATCTGGAA
GAGCCGCAGA ACACCGCCAA GTCGGTGGAG CTGATGGCCC TGCGTTACAT CGTGCTGACC
TCGGTGGACC GCGACGACCT CGAAGACGGC GGCGCCAGCC ACTACGCAGC CTGCGTGCGG
GCGATCAAGG AGAACACCCC GCAGGTGGTG GTCGAAGCCC TGACCCCGGA TTTCGATGGC
GATCATCAGG CCATCGAACG CGTGGTGGAC TCGGGCCTGG AGGTGTTCGC GCAGAACGTC
GAGACGGTCA AGCGTCTGAC CCATGTGGTG CGTGACCCGC GCGCCGGCTA CGAGAAGACC
CTCAAGGTGC TTGAGCACGC CAAGAAGCAC CGTCCGCAGG TGCTGACCAA GACCAGCCTG
ATGCTCGGCC TGGGCGAAAC CGATGAGGAA ATCCTGGAAA CCATGGATGA CCTGCGTGCC
ATCGGCGTGG ACATCCTCAC CCTCGGCCAG TACCTGCAAC CCACGCGCAA CCACCTGAAG
GTACAGCGCT GGGTCAGCCC CGAAGAGTTC AACCGCCTGC GTGACATCGG CCTGGAGAAG
GGCTTCATGG AAGTCGCCGC CGGCCCGCTG GTCCGTTCCA GCTACCGCGC CGATCGCGTG
TTCGAGAAGA ACAACCTGGG CCTGGCCGCC CCGCTTCCGG TGCCCGGCCA GGAGGTCGAC
GCCAGCCTGA TTCCGGCGCT GAACCTGAAC TGA
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| Protein sequence | MSDTSSPKPV ASGEKFRTAQ GITAIKDGQK RRASAEPQVF EPKPKWLRVK APGGSRFEAV
KRNVGEHRLS TVCQESHCPN MGECWSNGTA TIMLMGSVCT RACRFCAVDT GNPNGWLDLE
EPQNTAKSVE LMALRYIVLT SVDRDDLEDG GASHYAACVR AIKENTPQVV VEALTPDFDG
DHQAIERVVD SGLEVFAQNV ETVKRLTHVV RDPRAGYEKT LKVLEHAKKH RPQVLTKTSL
MLGLGETDEE ILETMDDLRA IGVDILTLGQ YLQPTRNHLK VQRWVSPEEF NRLRDIGLEK
GFMEVAAGPL VRSSYRADRV FEKNNLGLAA PLPVPGQEVD ASLIPALNLN
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