| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3492 |
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| Symbol | |
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| ID | 5105960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3853029 |
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| End bp | 3854699 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504744 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001188972 |
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| Protein GI | 146308507 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC TCAAAGACCC CTCGCAGAAG TACCGTCCGT TCACGCCCAT CGCCCTGCCC
GACCGCACCT GGCCGGACAA GGTCATCGAC CGCGCTCCGA TCTGGCTGTC CACCGACCTG
CGCGACGGCA ACCAGTCGCT GATCGAGCCG ATGGACGCCG AGAAGAAGAT GCGCTTCTTC
AAGTGCCTGG TCGCGGTGGG CCTGAAGGAA ATCGAAGTGG GCTTCCCGTC CGCCTCGCAG
ACCGACTTCG ACTTCGTTCG CGAGCTGATC GAGGGCGGCC ATATTCCCGA CGACGTGACC
ATCCAGGTGC TGACCCAGGC CCGTGACGAT CTCATCGAGC GCACCTTCGA GTCGCTCAAG
GGCGCCAAGC GCGCCATCGT CCACTACTAC AACGCCTGCG CGCCGAGCTT CCGCAAGATC
GTCTTCAACC AGGACAAGGC CGGCGTCAAG GCCATCGCCG TGGCTGCCGG CAAGACCATC
AAGCGCCTGG CCGCCGCACA GCCGGATACC CAATGGGGCT TCGAGTATTC GCCGGAGGTG
TTCAGCTCGA CCGAGACCGA TTTCGCCGTC GAGGTGTGCA ACGCGGTAAT CGAGGTGTTC
CAGCCGACCC CGGCGAACAA GCTGATCCTC AACCTGCCGG CCACCGTCGA GTGCGCCACG
CCGAACAATT ACGCCGACCA GATCGAATGG TTCGGCCGCC ACGTCGACCG CCGCGACAGC
GTGCTGATCA GCGTGCACAC CCATAACGAC CGCGGCACCG GCGTGGCTGC CTCGGAGCTG
GCGGTGATGG CCGGCGCCGA TCGTGTCGAG GGCTGCCTGT TCGGCAACGG CGAGCGCACC
GGCAACGTCT GCCTGGTGAC TCTGGCATTG AACCTCTACA CCCAGGGCGT CGATCCGCAG
CTGGACTTCT CCGACATCGA CGCGGTGCGC AAGGTGGTCG AGGACTGCAA CCAGATCCCC
GTGCACCCGC GCCACCCCTA TGCCGGCGAC CTGGTCCACA CCGCCTTCTC CGGCTCGCAC
CAGGACGCCA TCCGCAAGGG CTTCGCCCAG CAGAAAGATG ACGCCGTATG GGAAGTGCCC
TACCTGCCGA TCGACCCGGC CGACATCGGC CGCGACTACG AGGCGGTGAT TCGCGTCAAC
AGCCAGTCCG GCAAGGGCGG TATCACCTTC CTGCTCGAGC AGGAGTACGG CATCAGCCTG
CCGCGACGCA TGCAGATCGA GTTCAGTCAG GTGGTGCAGC GCGAAACGGA TCGCCTGGGC
CTGGAAATGA CCGCCGCGCA GATCTATCAG CTGCTTGAAA GCGAGTATCT GCAGGCCAGC
GCCCCCTACG CCCTGAAAGG CCATCGCCTG CAGGAAGAGA ACGGCACCAG CGCAGTGGAC
GTGGAAGTGA TCAGCGCTGG CGAAAGCCAC CACTGGCGAG GCATCGGCAA GGGCCCGCTG
GAAGCCTTGG TGGCCGGCCT GCCGGTGGCC GTCGAGATCA TGGACTACAG CGAGCACGCC
ATCGGCGCCG GCACCAATGC CAAGGCCGCG GCGTACATTG AGCTGCGCGT CAACGGCGGC
CGCGCCCTGC ACGGCATCGG CATCGACGAG AACCTGACCA CCGCCAGCTT CCGCGCCCTG
TTCAGCGCGC TGAACCGCGC CCTGAGCCAG GCCGAGTCGC GGGCGGCCTG A
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| Protein sequence | MTMLKDPSQK YRPFTPIALP DRTWPDKVID RAPIWLSTDL RDGNQSLIEP MDAEKKMRFF
KCLVAVGLKE IEVGFPSASQ TDFDFVRELI EGGHIPDDVT IQVLTQARDD LIERTFESLK
GAKRAIVHYY NACAPSFRKI VFNQDKAGVK AIAVAAGKTI KRLAAAQPDT QWGFEYSPEV
FSSTETDFAV EVCNAVIEVF QPTPANKLIL NLPATVECAT PNNYADQIEW FGRHVDRRDS
VLISVHTHND RGTGVAASEL AVMAGADRVE GCLFGNGERT GNVCLVTLAL NLYTQGVDPQ
LDFSDIDAVR KVVEDCNQIP VHPRHPYAGD LVHTAFSGSH QDAIRKGFAQ QKDDAVWEVP
YLPIDPADIG RDYEAVIRVN SQSGKGGITF LLEQEYGISL PRRMQIEFSQ VVQRETDRLG
LEMTAAQIYQ LLESEYLQAS APYALKGHRL QEENGTSAVD VEVISAGESH HWRGIGKGPL
EALVAGLPVA VEIMDYSEHA IGAGTNAKAA AYIELRVNGG RALHGIGIDE NLTTASFRAL
FSALNRALSQ AESRAA
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