| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3426 |
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| Symbol | |
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| ID | 5105898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3781365 |
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| End bp | 3783581 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640504682 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001188910 |
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| Protein GI | 146308445 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGC CACCTTCCAG CTCTGAATCG GCTGGGTTCG CACTCCTTGA GCCGCGAATC
CAGCGCTGGA TATGGTCCGA AGGCTGGACC TCCCTGCGCG ATGCCCAGGA GCGCGCTATC
CCTGCGCTTT TGGGCGCGGA TCAGGATGTC ATCATCGCGG CGGCTACAGC TGCAGGGAAA
ACCGAGGCCG CGTTCCTGCC CATCCTTACC AACCTCCTGC AGGACACAGA AACGCCAGGG
GCGGTGCTTT ACATCAGCCC GTTAAAGGCT CTCATCAATG ACCAGTGGGA TCGTTTGGCG
AGACTTTGCG ATGAGCTTGA ACTTCCAGTC ATTGCTTGGC ATGGGGATAT ATCAGCGAGC
CGCAAACATC GCTTCCTCAA GTCCCCGGAA GGCATTCTGC TGATCACGCC GGAGTCGCTC
GAAGCTCTTT TCGTCAACAG GGGGACCAGT CTAGCGGGAT TGTTTGCCAA CCTACGGTAC
CTAGTGGTGG ATGAGCTCCA TGCCTTTATC GGTAGTGAGC GAGGCAAGCA GCTCCAGTCA
CTCATGCATC GAGTGGAAAC AATCATTGAT CGCCCCCTGC CCAGGGTTGG TCTTTCCGCC
ACGCTGGGCG ACATGATGCT GGCCGCTGCC TTTTTGCGTC CCAATGCCCC TCATCATGTA
TCGGTGATTG AGTCCAAGGG GAGTGGCCAG ATACTTAAGG TTCAGATTAG AGGGTATGTG
GAGTCCAAGC ATGCGCTCCC GATACAGCCT GAAGATGATG AGGTTTTTTC TCCGGACCAT
GCCATCGCAG AGCACCTCTT TCAGGTACTA CGGGGCAGCA ACAACCTGAT CTTCCCCAAC
AGTCGAACTC AGGTGGAGTG GTTCGCTGAC AATCTGCGTC GCCGTTGCGA GCAGGATGGT
GTACCGAACG AGTTCTGGCC GCATCACGGC AGCTTGGCGA AGGACATTCG AGAGGAAACC
GAGAAAGCGC TGAAAGGCGG TGACCGGCCT GCCACCGCAG TTTGCACTAC CACGCTGGAG
CTTGGGGTCG ATATAGGCAG CATCAAGACG GTGGTGCAGA TCGGGGCGCC GCCATCGGTA
GCCAGCTTAC GTCAGCGCTT GGGTCGATCC GGGCGCCGTC CGGGAGAAGC AGCCATTCTC
CGAAGTTACT GCAAGGAGCG TCAGCTGGAC GATGGCTCGC CACTGTCGGA TCGACTTCGC
CAGGGTTTGC TGCAAAGCAT CGCGATGATC CGGTTGTTGA TGCAGGGCTG GTTCGAGCCA
CCTCGTGTTC ATGGCCTTCA TTTATCGACA CTGGTACAGC AGTGCCTCTC GGTGATAGCC
CAGCGGGGTG GAGCTACAGC TGCAGAGCTG TGGAGCACCT TGATATGCAG TGGTCCGTTC
ACTGGGGTGG AGCAGGGCAG CTTCCTCAGT TTGCTTCGTG CCCTCGGTGA GCGCGATTTG
ATAACCCAGG AACCATCGGG GCTCCTGCTG CCCGGTGTGA TGGGGGAACG CATGATCAAC
CACTACGACT TCTACAGTGC ATTTGTCAGC AATGAAGAGT TCCGCCTGGT ATGCGATGGC
AAACCACTTG GCGCATTGCC CGTCTCCAGG CCACTGACCG TCGATCAGCG CATCATCTTT
GCGGGGCGCC GCTGGCGGGT CACGAGCGTG GACACTAAGG CCAAGGTCAT CGTCGTGAGA
TCCGATCCTG GTGGTGCTCC CCCGTCCTTC GACGGGCTTG GAGCCCGTGT ACATGATCGG
GTTCGGCAAG AGATGAAGGC CGTCTTGCTG GAGACGGACA TCTATCCCTA TCTCGATACC
ACGGCGCAGG AACTACTGGC TCAGGCGCGT AGAACCTTTT CGGAGCTCGG ATTGGAACAT
TCGAGCATGA CCGAAAGCGG AGGTAAGACT TACCTTTTCA CCTGGCAAGG CGATTGGACG
AACGATGCAC TGGCTATCTT GCTGACGTAT ACCGGACTAG CCAGTGAGAA CAGTGGATTG
GTCATCGAGG TTGAGGGAGA TCGGACGTCG CTTGAAAGCA AGCTGCGCGA GATCGCCGAG
TGGGATGGCA TTGATGAATC CGCTGTTCTG GTGGAAGTAC AGAACATGGC TCAAGAGAAA
TGGGATTGGG TGCTCCCGCC AGCGTTACTC ATGCAGTCAT ACGCCACAAT GCAGCTGGAT
TTGGGTGGAG CAAAGACATT GGCAGTGGGG CTGATGAGCC CTGCGGTGAC TCCCTGA
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| Protein sequence | MSLPPSSSES AGFALLEPRI QRWIWSEGWT SLRDAQERAI PALLGADQDV IIAAATAAGK
TEAAFLPILT NLLQDTETPG AVLYISPLKA LINDQWDRLA RLCDELELPV IAWHGDISAS
RKHRFLKSPE GILLITPESL EALFVNRGTS LAGLFANLRY LVVDELHAFI GSERGKQLQS
LMHRVETIID RPLPRVGLSA TLGDMMLAAA FLRPNAPHHV SVIESKGSGQ ILKVQIRGYV
ESKHALPIQP EDDEVFSPDH AIAEHLFQVL RGSNNLIFPN SRTQVEWFAD NLRRRCEQDG
VPNEFWPHHG SLAKDIREET EKALKGGDRP ATAVCTTTLE LGVDIGSIKT VVQIGAPPSV
ASLRQRLGRS GRRPGEAAIL RSYCKERQLD DGSPLSDRLR QGLLQSIAMI RLLMQGWFEP
PRVHGLHLST LVQQCLSVIA QRGGATAAEL WSTLICSGPF TGVEQGSFLS LLRALGERDL
ITQEPSGLLL PGVMGERMIN HYDFYSAFVS NEEFRLVCDG KPLGALPVSR PLTVDQRIIF
AGRRWRVTSV DTKAKVIVVR SDPGGAPPSF DGLGARVHDR VRQEMKAVLL ETDIYPYLDT
TAQELLAQAR RTFSELGLEH SSMTESGGKT YLFTWQGDWT NDALAILLTY TGLASENSGL
VIEVEGDRTS LESKLREIAE WDGIDESAVL VEVQNMAQEK WDWVLPPALL MQSYATMQLD
LGGAKTLAVG LMSPAVTP
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