Gene Pmen_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3311 
Symbol 
ID5105784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3654106 
End bp3654531 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID640504568 
ProductCBS domain-containing protein 
Protein accessionYP_001188796 
Protein GI146308331 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.881932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAT CCATCAAGGT GCGGGACTAC ATGACTCGCC ATCTGGTGAC CTTCAGATCG 
GATACCGATC TGTTCACCGC CATCAACCGA CTGCTGGAGC ACCGCATTTC CGGTGCGCCG
GTGGTCGATT CCCAGGGCCA TCTGATTGGT CTGCTGTCGG AGGGCGATTG TCTGCGAGGC
ATTCTCTCCG GGGCCTATTA CGAGGCGACC GGCGGAACGG TCAGCACCTA CATGACCACC
GAGGTGGAGA CGGTGACGCC GGAGGCCGAC ATCATCGAGT TGTCCGAGCG TTTTCTGCGG
GGACGGCGGC GGCGTTTGCC GGTGATCGAG CACGGTCGTC TGGTGGGGCA GATCAGTCGC
TGTGACGTGC TGCGCGCCGT CAAGGAATTC GCCCAGCACG AGCAGGGCAC CCTGGAGGTA
GGCTGA
 
Protein sequence
MLKSIKVRDY MTRHLVTFRS DTDLFTAINR LLEHRISGAP VVDSQGHLIG LLSEGDCLRG 
ILSGAYYEAT GGTVSTYMTT EVETVTPEAD IIELSERFLR GRRRRLPVIE HGRLVGQISR
CDVLRAVKEF AQHEQGTLEV G