Gene Pmen_3304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3304 
Symbol 
ID5105777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3646945 
End bp3647847 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID640504561 
Producthypothetical protein 
Protein accessionYP_001188789 
Protein GI146308324 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCA CCGCGTTCCC CCGGCATATC GCCGCGCTGA TTCTCGCCAC CCTGGCCTGC 
TCCTTCGCCG GCAACCATAT CGCCGCACGC ATCGCCTTCG ATCATGAGGC CGGTCTGCTG
CTGGCGATTC TCTGCCGGTC CGGGGTGACT TTCCTGGTGC TCACCGTGCT GGTGCTGTGG
CAACGCGACT CGCTGCGCCT GAGCCGCCAG ACCTGGGGCT GGCAACTGAT GCTGGGCCTG
CTGATCGCGG TACAAAGCTT CTGCATCTAC TCGGCGGTGG CACGCATTCC GGTAGGCCTG
GCGCTGCTGG TGGTGAACCT CTCGCCGATC CTGCTGGCGC TGCTCACCTG GCTGCTCGGC
GGTCCGGCAC CGACCCGCCG CGCGGCGCTG ATCATGGGCG TAATCCTGTT CGGCCTGGTG
CTGGTGCTGG ACGTACCGGC GCGCCTGTCC GGCCAGGGCG TCAGCGACGA ACGCTGGGTC
GAAGGCGTGC TGTTCAGCCT GACCGCGGCG GCGGTGTTCG CCGTGGCCCT GTGGATCACC
GAGCATCGTC TGTCGGCCAT GCCCGGACGG GTGCGCAGCA TGCTGACCAT GGCGGTGGTG
TTCAGCGCTT CGGCCCTGGC CGGCGCCAGC GGCGCCCTGC CCGGCGGCCT CGGCCTGCCC
AACGCCCTGG CCGGCTGGAT CGCCCTGGCG GTGCTGGTGC TGCTCTACGG CACCGCCTTC
TCGCTGCTGT TCATCCTCAT GCCGCGCCTG GACATCGCGC GCAACGCACC GGTGATGAAC
ATGGAGCCGG TGGCCGGCAT GCTGTTCGGC TGGCTGATCC TCGGCCAGTT GCTCGGCGCC
CTGCAGGTGG TCGGCGGGGT GATCGTGGTC GGCGGCATCA TCGCCCTGGC TTATCGCCGC
TAG
 
Protein sequence
MPATAFPRHI AALILATLAC SFAGNHIAAR IAFDHEAGLL LAILCRSGVT FLVLTVLVLW 
QRDSLRLSRQ TWGWQLMLGL LIAVQSFCIY SAVARIPVGL ALLVVNLSPI LLALLTWLLG
GPAPTRRAAL IMGVILFGLV LVLDVPARLS GQGVSDERWV EGVLFSLTAA AVFAVALWIT
EHRLSAMPGR VRSMLTMAVV FSASALAGAS GALPGGLGLP NALAGWIALA VLVLLYGTAF
SLLFILMPRL DIARNAPVMN MEPVAGMLFG WLILGQLLGA LQVVGGVIVV GGIIALAYRR