| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3272 |
|---|
| Symbol | |
|---|
| ID | 5106779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3622355 |
|---|
| End bp | 3622756 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640504529 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001188757 |
|---|
| Protein GI | 146308292 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3631] Ketosteroid isomerase-related protein |
|---|
| TIGRFAM ID | [TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA CCGAACTGGT TCAGGCCTAC TACGCCGCCT TCAACGCCGG CGACATGCCC
GCCTTCCTCG ACCTGCTGGC CGAAGACGTG GTGCACGACA TCAACCAGGG CGAACGCCAG
ATCGGCAAGG CCACCTTCGC CGCCTTCATG GACAAGATGA ACCGCTGCTA CCGCGAGCGC
CTGGCCGACA TCGTGGTGAT GCAGAACGTC GAAGGCAGCC GCGCCGCCGC CGAGTTCGTG
GTGCACGGCG AGTACCTGGC CGACGACGAA GGCCTGCCGC CCGCCAACGG CCAGACCTAC
GTGCTGCCCG CCGGCGCCTT CTTCGAGATC AAGGACGGCA AGGTGGCGCG CGTCAGCAAC
TACTACAACC TCAACGACTG GATCGCACAG GTGGGCGGCT GA
|
|---|
| Protein sequence | MTATELVQAY YAAFNAGDMP AFLDLLAEDV VHDINQGERQ IGKATFAAFM DKMNRCYRER
LADIVVMQNV EGSRAAAEFV VHGEYLADDE GLPPANGQTY VLPAGAFFEI KDGKVARVSN
YYNLNDWIAQ VGG
|
|---|
| |