Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2364 |
Symbol | |
ID | 5108206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2610291 |
End bp | 2611085 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640503606 |
Product | NLPA lipoprotein |
Protein accession | YP_001187854 |
Protein GI | 146307389 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0111009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00286659 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCAAGA CCCTGAAAAC CCTGACCCTC GCCACTCTGC TCGCCGCCAG CAGCCTGGCG CTGGCCGAAC CGGCCCTGAA ACTTGGCACC ACCGCCGCCT TCGCCCCGCC GCTGGAAGTG GCCGTGGCCG AGGCGAAGAA ACAGGGCCTG GAGGTGGAGC TGGTCGAGTT CACCGACTGG ATCGCGCCCA ACGTCAGCCT GGCCAACGGC GATATCGATG TGAACTACTT CCAGCACATC CCCTTCCTGG AGAACGCCAA GTCCGAAGGC GGTTATGACC TAGTGCCGGT GGCACGCGGC GTGCTCAACA ACGTCGGCCT GTACTCGAAA AAACACAAGG ACTTCTCCAC CCTGCCGGAT GGCGCCAAGG TGGCCATCGC CAACGACCCG ATCAATGGCG GACGAGGCCT GCAACTGCTG CGCAAGGCCG GGCTGATCGA GCTCAAGCCG GACGTCGGCT ACAAGGCCAC TCTGGAGGAC ATCACCGCCA ACCCGAAGAA CATCCGCATC ATCGAGCTGG AAGCCGTGCA ACTGGTGCGT GCCCTGGATG AAGTGGACGT GGCCCAGGGC TACCCGCACT ACATCCGCCT GGCCGGCACC CATGACCCGG AATCGGCGCT GCTGTTCGAC GGCCTGGACA ACCCCGAGTA CATCATCCAG TTCGTCACTC AGCCGGGCAA AGCCAAGGAC GCCCGCCTGC TCAAGTTCAT CGACATCTAC CAGCACTCGC CGGCCGTGCG CACCGCCCTG GACAAGGCCC ACGGCAATCT CTACCAGCCG GGTTGGGAGA GCTGA
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Protein sequence | MLKTLKTLTL ATLLAASSLA LAEPALKLGT TAAFAPPLEV AVAEAKKQGL EVELVEFTDW IAPNVSLANG DIDVNYFQHI PFLENAKSEG GYDLVPVARG VLNNVGLYSK KHKDFSTLPD GAKVAIANDP INGGRGLQLL RKAGLIELKP DVGYKATLED ITANPKNIRI IELEAVQLVR ALDEVDVAQG YPHYIRLAGT HDPESALLFD GLDNPEYIIQ FVTQPGKAKD ARLLKFIDIY QHSPAVRTAL DKAHGNLYQP GWES
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