Gene Pmen_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2297 
Symbol 
ID5108532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2535535 
End bp2535912 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content68% 
IMG OID640503539 
ProductRho termination factor domain-containing protein 
Protein accessionYP_001187787 
Protein GI146307322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0189843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0000124515 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCCGAG GCAGCAAAGC CAAGTACACG GAAAAACAGA AGCGCAAGGC CGAGCACATC 
GAGGACAGCT ACAAGGCTCG CGGCGTACCC GAGGAGAAGG CCGAAGCGCG CGCCTGGGCC
ACGGTCAACA AGCAGTCCGG TGGCGGCGAG AAGGCCGGAG GCTCGGGCCG CAAGACCAGC
GCCGGCGCCA AGCAGCAGGC CCGCGAATCG TCCGCCCAGC GCGCGGCCAA GACACGCCAG
GGCGTGCCCC GCGCGGGGCA GCAGCTGGAG TCGATGACCC GTGACGAGCT GATGGATCTG
GCGCGCAAAC GCGACCTGTC CGGCCGTTCG CGCATGCGCA AGCAGGAACT GGTGGAAGCG
CTGCGCAAGA AGCAGTGA
 
Protein sequence
MPRGSKAKYT EKQKRKAEHI EDSYKARGVP EEKAEARAWA TVNKQSGGGE KAGGSGRKTS 
AGAKQQARES SAQRAAKTRQ GVPRAGQQLE SMTRDELMDL ARKRDLSGRS RMRKQELVEA
LRKKQ