Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2297 |
Symbol | |
ID | 5108532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2535535 |
End bp | 2535912 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503539 |
Product | Rho termination factor domain-containing protein |
Protein accession | YP_001187787 |
Protein GI | 146307322 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0189843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0000124515 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCCGAG GCAGCAAAGC CAAGTACACG GAAAAACAGA AGCGCAAGGC CGAGCACATC GAGGACAGCT ACAAGGCTCG CGGCGTACCC GAGGAGAAGG CCGAAGCGCG CGCCTGGGCC ACGGTCAACA AGCAGTCCGG TGGCGGCGAG AAGGCCGGAG GCTCGGGCCG CAAGACCAGC GCCGGCGCCA AGCAGCAGGC CCGCGAATCG TCCGCCCAGC GCGCGGCCAA GACACGCCAG GGCGTGCCCC GCGCGGGGCA GCAGCTGGAG TCGATGACCC GTGACGAGCT GATGGATCTG GCGCGCAAAC GCGACCTGTC CGGCCGTTCG CGCATGCGCA AGCAGGAACT GGTGGAAGCG CTGCGCAAGA AGCAGTGA
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Protein sequence | MPRGSKAKYT EKQKRKAEHI EDSYKARGVP EEKAEARAWA TVNKQSGGGE KAGGSGRKTS AGAKQQARES SAQRAAKTRQ GVPRAGQQLE SMTRDELMDL ARKRDLSGRS RMRKQELVEA LRKKQ
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