Gene Pmen_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2215 
Symbol 
ID5109160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2450981 
End bp2451442 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content56% 
IMG OID640503459 
Producthypothetical protein 
Protein accessionYP_001187707 
Protein GI146307242 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0219296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA GCACGTACAT GAAAGCTAAA TATCTGGCCT TACTGGCCGC TCTCTCCGTC 
ACGTCTGCGG TTCAAGCAGC TGATGCCCTG ACGATTGATG TCCATCGTGA TGCCAATTGC
GGATGTTGCA AGAAGTGGAT TTCACACCTC GAAGCGAATG GCTTCAAAGT CGTCGACCAT
GTTGAAAGCA ACATGACAGC AGTGAAGCAA AGACTGGGCG TCGCGCCACG GTTAGCGTCT
TGCCACACCG CGGTGATTGA CGGCAAGTTC GTCGAAGGTC ATGTGCCGGC GGCTCAGGTC
ATCGAACTCA CCAAGCGCGA TGATCTGCTG GGCATCGCTG TTCCCGGGAT GCCGGCGGGC
TCCCCCGGCA TGGAAGTCGA TGGCGTACAG CATGCCTACC AGGTCATTGG CTTGACCAAG
ACGGGTTCTG ATCAGGTCGT TGCAGAATAT CCCGCCCAGT AG
 
Protein sequence
MAKSTYMKAK YLALLAALSV TSAVQAADAL TIDVHRDANC GCCKKWISHL EANGFKVVDH 
VESNMTAVKQ RLGVAPRLAS CHTAVIDGKF VEGHVPAAQV IELTKRDDLL GIAVPGMPAG
SPGMEVDGVQ HAYQVIGLTK TGSDQVVAEY PAQ