Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2215 |
Symbol | |
ID | 5109160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2450981 |
End bp | 2451442 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640503459 |
Product | hypothetical protein |
Protein accession | YP_001187707 |
Protein GI | 146307242 |
COG category | [R] General function prediction only |
COG ID | [COG3019] Predicted metal-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0219296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA GCACGTACAT GAAAGCTAAA TATCTGGCCT TACTGGCCGC TCTCTCCGTC ACGTCTGCGG TTCAAGCAGC TGATGCCCTG ACGATTGATG TCCATCGTGA TGCCAATTGC GGATGTTGCA AGAAGTGGAT TTCACACCTC GAAGCGAATG GCTTCAAAGT CGTCGACCAT GTTGAAAGCA ACATGACAGC AGTGAAGCAA AGACTGGGCG TCGCGCCACG GTTAGCGTCT TGCCACACCG CGGTGATTGA CGGCAAGTTC GTCGAAGGTC ATGTGCCGGC GGCTCAGGTC ATCGAACTCA CCAAGCGCGA TGATCTGCTG GGCATCGCTG TTCCCGGGAT GCCGGCGGGC TCCCCCGGCA TGGAAGTCGA TGGCGTACAG CATGCCTACC AGGTCATTGG CTTGACCAAG ACGGGTTCTG ATCAGGTCGT TGCAGAATAT CCCGCCCAGT AG
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Protein sequence | MAKSTYMKAK YLALLAALSV TSAVQAADAL TIDVHRDANC GCCKKWISHL EANGFKVVDH VESNMTAVKQ RLGVAPRLAS CHTAVIDGKF VEGHVPAAQV IELTKRDDLL GIAVPGMPAG SPGMEVDGVQ HAYQVIGLTK TGSDQVVAEY PAQ
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